Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151136g00017 ATGGAAGCTATTGAAGGATCACAGGTTCTGATTGTGGTCTTCTCAGTGAACTATGCTTCTTCCACATGGTGCTTGCAAGAACTTGCAAAGATAGCTGATTGCATTCAAGAAACGGGACAGCGTGTTCTGCCTGTCTTCTATGATGTGAGTCCATCTGAGGTCAGAAAGCAAACTGGGAATTATGAGAAATCTTTTATGGAACATGAAGAAAGATTCAAAGATGATGCAGAGATGATGGAGCAATTGCCAAGATGGAGGGAAGCTCTAACACAAGTAGCCAATCTCTGTGGCTGGGATGTCAGGGATAAGTCACAATCTGCTGAGATTGAAAATCTTGTCAAACTGGTAAAAAACATACTGAGTCCCAAACCATCATCAAGTCTATCTAATGATATAGTTGGGATGCACTCCCCTTTACAAGAACTAGAAAAGCTTCTAATTTTGGACTCAGAAGATGGTGTTCGAGTTGTAGGAATTTGTGGAATGGGTGGCATAGGAAAGTCAACTCTTGCCACTATTTTCTATGAAAAAATCTCTCGTCACTATGATGTTTCATGTTTTGTTGAAGACGTAAGTGGAACTTACAGAGGCTATGGTTCACTTGGTGTACAAAAGCAACTTCTTTGTCAAGCTTTTATGGAAGAAGATTTTCGGATATGTAGTCTTTCAATGGCAACTAACTTGATTCGAACTAGGTTAAGCCATAGAAAGGTTCTCATAATTTTGGATAATGTTGAAAAGGGGATTCAGTTGGAGAAGTTGGCTTTAAGAAGAGAATGGTTAGGTAATGGGAGTAGAATAATCATAGTTTCTAGAGATGAACATATATTGAGAGAGTTTGAAGTTGATGATGTTTACAGAGTTCAACTCTTAAATGATGAGAATGCTCTCCAATTGTTTTGCAGAAAAGCCTTCAAGTGTAATCATGTTACAGAAGATTACGAAAGCCTTACAAATTCTGCATTAAGATATGCTAAGGGACTTCCTTTAGCAATCAGAGTATTGGGCTCATTTTTGTTTGGGCGAGATGTGTGTGAGTGGAATAGTGCATTGGTTAGACTGAAAGAATATCCGACAAAAGACATCATGGATGTGCTACGAATCAGTTTTGATGAACTTGAGGATATGGAAAAAGAAATATTTCTTGATATTGCCTGTTTCTTTTCTGACAATGACGATGAAGAATCTGTAAAAGATATTCTACTTATCCGAGGATTTCATCCTGATATTAGTTTAAAAATTCTCGCTGATAAATCACTCATAACTTGCAATGGGTATTTCATTGATATGCACGATTTATTGAGAGAGTTGGGTAGAAGTATTGTTCGAGAAAAGTCACCCAAAAAACCAAGAAAGTGGAGCAGGTTATGGAACTATAAGGATCTAAGCCATGTCTTGTTAGAAAACAAGGTGGCAGAGAACCTTGAAGCTATAGTTCTACCAAAACTTGATGCAAATAGGGAAGAGTTGTTAGAAAGGACAACCTTGAGAGTTGAAGCTTTATCACAAATGAACTGCCTCAGATTACTTATACTCAGAGATGTTAAATTCTCAGGAAGCCTTGATTTTCTTTCTAACCAGTTGGCATATTTTGATTGGGAGGAATATCCTCTTACATGTTTGCCATCAAACTTTCAGCCAAATAAACTCGTTAAATTAATCCTACATCATAGCAGCATCAAAGAACTTTGGGAAGGAATAAAGTGTCTGCACAATTTGGAAGTTATGGAACTATGTCATTCCAAAAATCTAGTAAAGATACCAAATTTATCTCAAGCCCCAAATCTTTCACGCCTTGATCTTAAAGGATGCGTTAAATTGGTTCACCTTGATGCATCCGTTGGTTCTCTAGAAAAGCTTGGTTTCTTGAATCTGGAAAACTGCAAAAGTCTTGTTAGTATTCCCAACACCATATTTTATCTTAATTCTCTTCATGATTTAAATCTATCTGGCTGTTCAAAATTATTTAAATATCAGTTGTTAGTAAAACCAAGGCAAAACCAGCCGTGGAATACAGATCAAAGTATACAAAGGCCCATGACATCATCCATATGCAAAACTCTTACAAGGCCTCTTCATCTTTTCTCTTCTAAAAGGCTTGCCAATTCAGTTGGTTTGTTGGTACCTTCTTTGTCTTGTTTCCCAGCTTTGGTAACTCTTGACATAAGTTTCTGTAATCTACTTCAAATCCCTGATACTATTGGACAGTTGCGTTCTTTAGAATGTTTGAACATAGGGGGAAACAATATTGTTACACTACCTGATTGGATCAAGGAACTTCCCAAGCTAAGGCAGTTGAATTTGGAGTACTGTAAGCATCTAAAGTGGTTGCCTACTACCCTTTTGCCAATAGGAGTAGGTAGGTATGGAGGATTATATGTTTTCAACTGCCCCAATTTGAGTGACATGGAAGGTTGTCGTGTCACAGTTAGTTCATGGATGATAAAAGTGATTCAGGTGAGCATGCAATTCTCTTTTCCCAGATACACCATCCGTGTTGTTATTCCAGGAAGTAAAATTCCAACGTGGTTCAACAAACAGAATATGGGCAGTTCAATGAGGCTGGACCCTTTTCCCAATATGGATGAGAATAATTGGATTGGCATTGCTTGTTGTGTAACATTTGTTGTACATGATGCTCCAACTCAATTGCTTGAACCAAGGAGAAAAGGGCTTTTCGGTTGTGGTTTTCTTTCTAAACCGGGGTGTTCGGGCATTTTTTCCGTTGTTCCAATACGCTTCAAGAAAGATTTGATCACAACTGAAGTAGATCATATGTTGCTAATATTTTTCTCCCGGGAAGATTTCATTAATCATTATATAATGATTTTAAAAGAAGCGTCTCATGTTGATAGTTTTGAACTAGCTACCACGAGTGATTATCCCGAAGAAGTAGTAGAAGTGAAGAGTTGTGGTTACCGTTGGGTATTTAAGCAAGATTTGGAACAATTTAACCCAACAATGATGTATACCGCCAATTCTTCAACTCAGAAGCACAAGTTCTTGGCAGTTGAAGATGTACAATAA 3027 0.3763 MEAIEGSQVLIVVFSVNYASSTWCLQELAKIADCIQETGQRVLPVFYDVSPSEVRKQTGNYEKSFMEHEERFKDDAEMMEQLPRWREALTQVANLCGWDVRDKSQSAEIENLVKLVKNILSPKPSSSLSNDIVGMHSPLQELEKLLILDSEDGVRVVGICGMGGIGKSTLATIFYEKISRHYDVSCFVEDVSGTYRGYGSLGVQKQLLCQAFMEEDFRICSLSMATNLIRTRLSHRKVLIILDNVEKGIQLEKLALRREWLGNGSRIIIVSRDEHILREFEVDDVYRVQLLNDENALQLFCRKAFKCNHVTEDYESLTNSALRYAKGLPLAIRVLGSFLFGRDVCEWNSALVRLKEYPTKDIMDVLRISFDELEDMEKEIFLDIACFFSDNDDEESVKDILLIRGFHPDISLKILADKSLITCNGYFIDMHDLLRELGRSIVREKSPKKPRKWSRLWNYKDLSHVLLENKVAENLEAIVLPKLDANREELLERTTLRVEALSQMNCLRLLILRDVKFSGSLDFLSNQLAYFDWEEYPLTCLPSNFQPNKLVKLILHHSSIKELWEGIKCLHNLEVMELCHSKNLVKIPNLSQAPNLSRLDLKGCVKLVHLDASVGSLEKLGFLNLENCKSLVSIPNTIFYLNSLHDLNLSGCSKLFKYQLLVKPRQNQPWNTDQSIQRPMTSSICKTLTRPLHLFSSKRLANSVGLLVPSLSCFPALVTLDISFCNLLQIPDTIGQLRSLECLNIGGNNIVTLPDWIKELPKLRQLNLEYCKHLKWLPTTLLPIGVGRYGGLYVFNCPNLSDMEGCRVTVSSWMIKVIQVSMQFSFPRYTIRVVIPGSKIPTWFNKQNMGSSMRLDPFPNMDENNWIGIACCVTFVVHDAPTQLLEPRRKGLFGCGFLSKPGCSGIFSVVPIRFKKDLITTEVDHMLLIFFSREDFINHYIMILKEASHVDSFELATTSDYPEEVVEVKSCGYRWVFKQDLEQFNPTMMYTANSSTQKHKFLAVEDVQ 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151136g00017 1008 Gene3D - 290 374 IPR042197 -
Stsc151136g00017 1008 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 118 384 IPR027417 -
Stsc151136g00017 1008 SMART till_3 1 95 IPR000157 GO:0007165
Stsc151136g00017 1008 Pfam C-JID domain 835 982 IPR045344 -
Stsc151136g00017 1008 Pfam TIR domain 2 126 IPR000157 GO:0007165
Stsc151136g00017 1008 Gene3D Ribonuclease Inhibitor 461 677 IPR032675 -
Stsc151136g00017 1008 Gene3D Ribonuclease Inhibitor 678 808 IPR032675 -
Stsc151136g00017 1008 Gene3D - 1 120 IPR035897 -
Stsc151136g00017 1008 PRINTS Disease resistance protein signature 232 246 - -
Stsc151136g00017 1008 PRINTS Disease resistance protein signature 325 339 - -
Stsc151136g00017 1008 PRINTS Disease resistance protein signature 758 774 - -
Stsc151136g00017 1008 PRINTS Disease resistance protein signature 156 171 - -
Stsc151136g00017 1008 ProSiteProfiles TIR domain profile. 1 120 IPR000157 GO:0007165
Stsc151136g00017 1008 Pfam Leucine rich repeat 715 771 IPR001611 GO:0005515
Stsc151136g00017 1008 Pfam NB-ARC domain 146 360 IPR002182 GO:0043531
Stsc151136g00017 1008 SUPERFAMILY L domain-like 496 784 - -
Stsc151136g00017 1008 SUPERFAMILY "Winged helix" DNA-binding domain 361 466 IPR036390 -
Stsc151136g00017 1008 Gene3D - 121 285 IPR027417 -
Stsc151136g00017 1008 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 657 IPR044974 GO:0006952
Stsc151136g00017 1008 Pfam Leucine Rich Repeat 549 568 IPR011713 -
Stsc151136g00017 1008 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 98 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151136g00017 Stsc-Chr151136 93908 97645 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151136g00017 1 766 WRKY Transcription Factor Family AT4G12020 31.282 1.98e-87 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151136g00017 - - adu:107476580 1176