Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151136g00009 ATGGAAAGAAAAAGAAGAAGATCCTCTGTTTTCTGCTCTGTTTTCTTCGTCTCTCTTCTCTGTTTTCTCTCTCAACTTGCAACCTCAGAGGACGATTCCGAAGCTCTCTTGGCACTCAAATCTTCGATTGACGCACACAACAAGCTTCCATGGCGACCAGGGAGCGACGTGTGCACGTGGCAAGGCGTCAAAGACTGCTTCAATGGAAGGGTAAGAAAGCTCGTTATAGAATACTCCAACCTCACCGGAACCTTAGAATCGAAGATCCTGAACCGTTTGGATCAGCTTCGAGTTCTAAGCTTCAAAGGGAACTCACTCTCTGGTCAAATTCCACAGCTTTCAAGCTTAGTCAACCTCAAATCGATTTTCCTCAACGACAACAACTTCTCCGGCGAGTTTCCGGCGTCTATTTCCGACCTCCACCGTGTAAAAGTCATAGTTTTGTCAGGGAACAGAATCTCCGGCGAAATTCCGGCGTCGTTGCTGAATCTCCGGCGACTCTACATACTCTACTTGGAGGACAACTTGTTCACCGGGAAAATCCCGGGGTTTAACCAGACAAGTCTCAGGTACCTTAATGTTTCGAATAACAAACTTTCCGGCGAGATTCCGGCGACTCCGGCGTTGGTTCGGTTCAATGCTTCTTCATTTTCCGGCAACAGTAATCTGTGCGGCGACCAAGTGCACGTGCCATGCAAAAGTAACATCCTTTTGCCTCCTTCTATGAGCCCAAGGTCTTCCATGGTTCCAACAAAGAAGAAAACATCATCGAACCGCACGAAACTGATCAAGATTATTGGAGGAACCGTTGGTGGTGTTGTCTTGTTGCTTATTGTATTTGTTCTTGTGTTCTTCACGGTATGTAGAAACCGTAGGAAGAGGGTGAGTGGTGGAGCTAGAAGGAAAGGAAATGGGGTTGGGAGTGTGGAGGAAGTTGAAGATGGCGGCGGCGGCGGCGGGGGAGGTGGAGGTGGCAGCAGTGGTGGTAACAATGAAGGGAAACAAGGTGGTGGTTTTGCATGGGAAGGTGAGGGTCTAGGGAAGTTGGTGTTCCTTGGAGCAGGGGATAATAGGGAAATAATGAGTTACACATTAGAGGATTTGCTGAAGGCTTCAGCAGAGACACTTGGGAGGGGTATTATGGGAAGTACATATAAGGCAGTTATGGAATCAGGGTTCATTGTGACTGTTAAGAGGTTGAAGGATGCTAGGTACCCTTATTTGGATGAGTTTAAGGGACATATTGAAGTTCTTGGTAGGCTTAGGCACCCTAATTTGGTCCCACTTAGGGCTTATTTTCAAGCTAAGGAAGAAAGGCTTCTTGTTTATGATTACTTCCCTAATGGCAGCCTCTTCTCTCTCATTCATGGATCAAAAACTTCCGGCGGAGGAAAGCCTCTTCACTGGACATCCTGCCTCAAAATCGCCGAAGATCTCGCGACCGGGCTTCTCTACATCCACCAAAACCCCGGCTTAACTCATGGAAACCTCAAATCTTCTAATGTCTTGTTGGGTTCAGACTTTGAGTCCTGTCTTACCGACTATGGCCTCACAATGTTCCTTAACCCTGACTCAATGGATGAACCAAGTGCTACCTCTTTATTCTACAGAGCACCCGAATGCCGAAGCTTCCAGAGATCTCACACTCAACCGGCCGATGTATACAGCTTTGGAGTCCTTCTCCTTGAACTCTTAACAGGAAAAACACCCTTCCAAGACCTTGTCCAGGAACACGGCTCGGATATACCTAAATGGGTTAAATCGGTACGCGAGGAAGAGACAGAGTCCGGGGACGATCCTTCCTCGGGCAATGAAGCATCCGAAGAGAAGCTTCAAGCTCTATTGAACATAGCAATGGCATGTGTCTCGCTGGTGCCGGAGAATCGGCCGACAATGAGGGAAGTTCTGAAGATGATAAGAGACACAAGAGGGGAAGCTCAGGTATCTTCAAATAGTAGTGATCATTCACCAGGTAGATGGTCAGATACAGTTCAAAGCTTTCCAAGGGAAGAACACTTGAGCATATGA 2028 0.4744 MERKRRRSSVFCSVFFVSLLCFLSQLATSEDDSEALLALKSSIDAHNKLPWRPGSDVCTWQGVKDCFNGRVRKLVIEYSNLTGTLESKILNRLDQLRVLSFKGNSLSGQIPQLSSLVNLKSIFLNDNNFSGEFPASISDLHRVKVIVLSGNRISGEIPASLLNLRRLYILYLEDNLFTGKIPGFNQTSLRYLNVSNNKLSGEIPATPALVRFNASSFSGNSNLCGDQVHVPCKSNILLPPSMSPRSSMVPTKKKTSSNRTKLIKIIGGTVGGVVLLLIVFVLVFFTVCRNRRKRVSGGARRKGNGVGSVEEVEDGGGGGGGGGGGSSGGNNEGKQGGGFAWEGEGLGKLVFLGAGDNREIMSYTLEDLLKASAETLGRGIMGSTYKAVMESGFIVTVKRLKDARYPYLDEFKGHIEVLGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGSLFSLIHGSKTSGGGKPLHWTSCLKIAEDLATGLLYIHQNPGLTHGNLKSSNVLLGSDFESCLTDYGLTMFLNPDSMDEPSATSLFYRAPECRSFQRSHTQPADVYSFGVLLLELLTGKTPFQDLVQEHGSDIPKWVKSVREEETESGDDPSSGNEASEEKLQALLNIAMACVSLVPENRPTMREVLKMIRDTRGEAQVSSNSSDHSPGRWSDTVQSFPREEHLSI 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151136g00009 675 Gene3D Phosphorylase Kinase; domain 1 354 445 - -
Stsc151136g00009 675 MobiDBLite consensus disorder prediction 644 675 - -
Stsc151136g00009 675 Pfam Leucine rich repeat N-terminal domain 30 63 IPR013210 -
Stsc151136g00009 675 Pfam Leucine Rich Repeat 188 205 IPR001611 GO:0005515
Stsc151136g00009 675 MobiDBLite consensus disorder prediction 585 607 - -
Stsc151136g00009 675 Gene3D Transferase(Phosphotransferase) domain 1 446 662 - -
Stsc151136g00009 675 Pfam Leucine rich repeat 118 176 IPR001611 GO:0005515
Stsc151136g00009 675 SUPERFAMILY L domain-like 29 225 - -
Stsc151136g00009 675 Gene3D Ribonuclease Inhibitor 29 185 IPR032675 -
Stsc151136g00009 675 Gene3D Ribonuclease Inhibitor 186 235 IPR032675 -
Stsc151136g00009 675 MobiDBLite consensus disorder prediction 296 337 - -
Stsc151136g00009 675 SUPERFAMILY Protein kinase-like (PK-like) 374 650 IPR011009 -
Stsc151136g00009 675 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 18 645 IPR046959 -
Stsc151136g00009 675 Pfam Protein kinase domain 373 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151136g00009 675 FunFam Nuclear pore complex protein NUP107 29 183 - -
Stsc151136g00009 675 MobiDBLite consensus disorder prediction 643 675 - -
Stsc151136g00009 675 ProSiteProfiles Protein kinase domain profile. 370 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151136g00009 Stsc-Chr151136 50744 55279 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151136g00009 8 675 Receptor kinase-like Gene Family AT1G60630 61.708 0.0 779
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Stsc151136g00009 Pkinase 4.4e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151136g00009 - - gmx:100809866 956.436