Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151136g00002 ATGCTCTATTCCCTAGAGTACTTTGCTTTATTTGTAGCTATCATCTCGTTCTTTTCCATCCACATTTGGAGGATCAATAGAAACTCACCTATCCCAAATTTCCCCCCACTTGGTATGATACCAGCTATTTTGTTTAACCTCTCCAATATTCATGAATACATTACCAGCGCTTTGAAACACCATGGAGGTACTTTTAAACTTAGAGGACCCTTGTTCACAAACATCAACTTCTTCCTCACCAGTGATCCTATGAATGTGCACCACATTACAAGTAAGAACTTTGTCAACTATGGCAAAGGTTCTGAGTTCCATGAGATTTTTGAAAGTCTTGGAGATGGGATCTTTAATTCTGACTCACAAAATTGGAAGTACCAGAGGAACTTATTACAATCACTCTTTAAGCAAAACATCTTTGAGAATTTTGTTAGGAAAGTCATTCATAAGAAATTAGATGATTATTTACTTCCACTTTTGAATGAGGTTTCAAAATCAAGAACTAGTGTGGACTTGCAAGACATCTTTCAAAGATTCACTTTTGATAGTATTTGCTCCATAGTGTTGGCATTTGATCCCAATTGCCTTCCCAACAAGCTCTCTCAATTTCGAGAGGTTGCTGTTGAGAAAGCTTTCAACAAATCAGAGGTTGCAATTTTTTATAGACACCTCGTCCCTAGATGGTTATGGAAGCTACAGAGATGGCTCCGAATTGGACATGAGAAGGACACTATTTTTGGCCAAAAAATTCTGGACCAATTCTTCTGTGATCAAATACCATCCAATCGAGAATTCAACTACACCAAAGATGATGATGATGAATCAAACTTTGACATGATTAAAGCTCTTGTGGAGAAAAGTGGGATGAAACAAGTAGATTACAAGTTTCTAAGAGACACTGCAGTTAATCTCGTGTCAGCTGGAAGGGACACAATTAGTGCAAGTCTATGTTGGTTTTTCTGGCTTGTTTCAACTCACCCTAATGTTGAAACCAAGATCCTTGAAGAAATCAGAGAAAAGTTTAAAACAAATGAAGAAAATTGGCTCATTTCGGTGGTAAAAGACCTTGACAAGCTAATTTACTTGCATGGGGCTTTATGTGAAGCTTTGAGGCTTTTCCCTCCGGTTCCATATCAGCACAAATGTGCAATCAAATCTGATATACTTCCAAGTGGAGATCGTGTTGATGCAAATACTATGGTGTATTACTCCGTATACTCAATGGGAAGGATGGAACAGATATGGGGAAATGATTGCTTGGAATTTAAGCCTGAAAGGTGGATTTCGGAAAAAGGAATGAATATACAGGTACCATCATACAAGTTCATGGCTTTTAATGCAGGCCCAAGAAGTTGTTTGGGGAAAAATATAAGCTTTATCCAGTTGAAGATGATTGCCATTGCTTTGCTGTGGAACTTTCACTTCCAAGTGGTGGAAGGGCAGTCAGTGTGTCCAAGTGTTTCTATTGTTCTGCACATGAAGCATGGGTTGCAAGTCAGGGTTACTAAAAGAAGCAATTGA 1515 0.3835 MLYSLEYFALFVAIISFFSIHIWRINRNSPIPNFPPLGMIPAILFNLSNIHEYITSALKHHGGTFKLRGPLFTNINFFLTSDPMNVHHITSKNFVNYGKGSEFHEIFESLGDGIFNSDSQNWKYQRNLLQSLFKQNIFENFVRKVIHKKLDDYLLPLLNEVSKSRTSVDLQDIFQRFTFDSICSIVLAFDPNCLPNKLSQFREVAVEKAFNKSEVAIFYRHLVPRWLWKLQRWLRIGHEKDTIFGQKILDQFFCDQIPSNREFNYTKDDDDESNFDMIKALVEKSGMKQVDYKFLRDTAVNLVSAGRDTISASLCWFFWLVSTHPNVETKILEEIREKFKTNEENWLISVVKDLDKLIYLHGALCEALRLFPPVPYQHKCAIKSDILPSGDRVDANTMVYYSVYSMGRMEQIWGNDCLEFKPERWISEKGMNIQVPSYKFMAFNAGPRSCLGKNISFIQLKMIAIALLWNFHFQVVEGQSVCPSVSIVLHMKHGLQVRVTKRSN 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151136g00002 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Stsc151136g00002 504 CDD CYP86A 65 495 - -
Stsc151136g00002 504 Pfam Cytochrome P450 43 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151136g00002 504 Gene3D Cytochrome P450 17 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151136g00002 504 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151136g00002 504 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151136g00002 504 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151136g00002 504 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151136g00002 504 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151136g00002 504 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151136g00002 504 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151136g00002 504 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151136g00002 504 PANTHER CYTOCHROME P450 20 497 - -
Stsc151136g00002 504 SUPERFAMILY Cytochrome P450 23 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151136g00002 Stsc-Chr151136 4826 6340 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151136g00002 31 504 Cytochrome P450 AT2G23180 44.008 3.35e-152 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151136g00002 - - gmx:100791312 583.563