Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151135g00001 ATGAAAGCAGCTGCGCTTCTTCTTCTATGCTTCTTTCTCTTTTCTTTGTTAGTTTACGCAAAGAAATCGGGCGACGTTACAGCTTTGCAGATCGGCGTGAAGCACAAGCCAGCATCATGTGACGTCCAAGTGCACAAAGGAGATAGAGTCAAAGTACATTATCGGGGGAAACTCACTGATGGAACAGTTTTTGATTCTAGCTTTGAAAGAGATAATCCAATTGAATTTGAGCTTGGTACTGGTCAAGTGATCAAAGGTTGGGATCAAGGATTATTGGGAATGTGCCTGGGTGAGAAGCGGAAGTTAAAAATACCTGCTAGTCTTGGCTATGGGGAGCAAGGTTCTCCGCCAACCATCCCAGGTGGTGCAACTCTTATATTTGACACTGAGCTTGTGGGAGTGAACGGAAAAACTTTGGGTGGAGCAGCAGCAGAAGAGTCCGAGCTCTAG 450 0.4556 MKAAALLLLCFFLFSLLVYAKKSGDVTALQIGVKHKPASCDVQVHKGDRVKVHYRGKLTDGTVFDSSFERDNPIEFELGTGQVIKGWDQGLLGMCLGEKRKLKIPASLGYGEQGSPPTIPGGATLIFDTELVGVNGKTLGGAAAEESEL 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151135g00001 149 Gene3D - 17 135 IPR046357 GO:0003755
Stsc151135g00001 149 PANTHER PEPTIDYLPROLYL ISOMERASE 7 137 IPR044609 GO:0000413|GO:0003755|GO:0061077
Stsc151135g00001 149 SUPERFAMILY FKBP-like 36 137 - -
Stsc151135g00001 149 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 47 135 IPR001179 GO:0003755
Stsc151135g00001 149 FunFam Peptidylprolyl isomerase 15 135 - -
Stsc151135g00001 149 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 41 132 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151135g00001 Stsc-Chr151135 11998 17275 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151135g00001 48 133 Calmodulin-binding Proteins AT3G25230 32.967 8.64e-06 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151135g00001 K09569 - gmx:100305479 246.128