LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc151130g00020	ATGAGAGTTGTTAGGAGTTGGATTGTAAATAAGAAGAGAAAGCTTCTTGGAATTGAAGGGAGATTGGAGAAGATGATCAATTGCATGCGTTCTGGAGAGCAGGTTGCTGTTGATGAGATTGGTGGTTATTCATCAGAGTCACTTGCAACAAGGGACTATTCAGCTACAGCTAGTGGCTATTCATCTAGGCCTGGTGCTGCTGAATTTGATGCAAAGTTGGATAACAGCAACATTGAAGAAGCAGAGTCCACACTTCGTGAAAGTGGTTACTTGAACTATGAGGAAGCTAGAGCTTTGCTAGGAAGGCTTGAATATCAGAAGGGTAATTTTGAAGCTGCACTTCATGTATTTGAAGGAATAGACATTGCTGCTGTTGCTCCAAAGATGAAAATTTCTCTATCTAGAAGATGTGAACCGAATATGAATAGACGCCGTTCACAGAGTGATGCGGCGCCTCCTATGTCCATTCATGCTGTTAGTCTACTTCTTGAAGCTGTTTTACTCAAGGCAAAGTCATTGCAGATTCTTGGAAGGTTTCAAGTATATGAATTTTGCAGAAGCTGCTACATCATGCAAAACTATTTTGGACATTGTTGA	597	0.4087	MRVVRSWIVNKKRKLLGIEGRLEKMINCMRSGEQVAVDEIGGYSSESLATRDYSATASGYSSRPGAAEFDAKLDNSNIEEAESTLRESGYLNYEEARALLGRLEYQKGNFEAALHVFEGIDIAAVAPKMKISLSRRCEPNMNRRRSQSDAAPPMSIHAVSLLLEAVLLKAKSLQILGRFQVYEFCRSCYIMQNYFGHC	198

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc151130g00020	198	PANTHER	PROTEIN NPG1	26	188	IPR043376	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc151130g00020	Stsc-Chr151130	102719	103922	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc151130g00020	28	191	Calmodulin-binding Proteins	AT1G27460	52.410	1.27e-43	152

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc151130g00020	K21843		-	csav:115721751	242.276