Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151130g00008 ATGGGACTCAAATATCTTCCTCTCAAGCTTAAGGTTTTCCGGCTGAAACGGTTCCTGCTAGGTCGCGGCGGCAGAGGTGTAAAGAGAAAGCATGTGATGATGCCTGCAAAGAAGCCTTCATGGATGATGCCTGTAACACATGGATATTATGTGGTGGAACATCATCAAGGCTCTGAGAAAGATGTGTTGAACTTTGATTCAGTTGTGGTGCAAAGAGAGCAAATGGATCATAACGAACTGTGGTATTTCGGAATCTTTGATGCTGTAGTTGGAGATTGCGTTACCAAGTTCATGCAGTCCAATTTCTTCAACAAGAAGCTTCAAGAGTCTCATATAAGGAGGAAAAGTAAGGAAACACTGAAGAGAGCATACCTCGGTGCAAGGGCGAAGATAAGAGAGGAATATGAATCAGATGAAAGGAGCAGAATGGGTGCAGGATCATGTGTTATGGTGATAAATGGAGAGAAGCTTGTGATAGCAAACATGGGAGATTACAGAACTGTTGTCTGCAGAGATGGCATAGCTCATCATTACACATCATCCGGCAGACACCACCAACATTCATCGAAAACACATTGGTCTCGCAGACTCTTTCCAGGTAAAAGTCATTCTAGAGGCTCAGAACTTGTTGTCAAAGGAGAAAGGATTGATTCAGATACCGAGTTTCTGATATTGGCCAGCAATGGTATCTGGGAGGTTAGCAATTTAAACCATTAG 717 0.431 MGLKYLPLKLKVFRLKRFLLGRGGRGVKRKHVMMPAKKPSWMMPVTHGYYVVEHHQGSEKDVLNFDSVVVQREQMDHNELWYFGIFDAVVGDCVTKFMQSNFFNKKLQESHIRRKSKETLKRAYLGARAKIREEYESDERSRMGAGSCVMVINGEKLVIANMGDYRTVVCRDGIAHHYTSSGRHHQHSSKTHWSRRLFPGKSHSRGSELVVKGERIDSDTEFLILASNGIWEVSNLNH 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151130g00008 238 CDD PP2Cc 64 233 IPR001932 -
Stsc151130g00008 238 MobiDBLite consensus disorder prediction 180 199 - -
Stsc151130g00008 238 SUPERFAMILY PP2C-like 45 234 IPR036457 -
Stsc151130g00008 238 ProSiteProfiles PPM-type phosphatase domain profile. 64 238 IPR001932 -
Stsc151130g00008 238 PANTHER PROTEIN PHOSPHATASE 42 233 IPR015655 GO:0004722|GO:0006470
Stsc151130g00008 238 MobiDBLite consensus disorder prediction 179 204 - -
Stsc151130g00008 238 Pfam Protein phosphatase 2C 74 180 IPR001932 -
Stsc151130g00008 238 Coils Coil 236 238 - -
Stsc151130g00008 238 Gene3D - 37 237 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151130g00008 Stsc-Chr151130 29313 30956 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151130g00008 1 233 PP2C-type Phosphatase Gene Family AT3G23360 43.388 1.06e-55 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151130g00008 K19704 - gmx:100794054 270.011