Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151130g00007 ATGGGACTCAAATATCTTCCTCTCAAGCTTAAGGTTTTCCGGCTGAAACGGTTCCTGCTAGGTCGCGGCGGCAGAGGTGTAAAGAGAAAGCATGTGATGATGCCTGCAAAGAAGCCTTCATGGATGATGCCTGTAACACATGGATATTATGTGGTGGAACATCATCAAGGCTCTGAGAAAGATGTGTTGAACTTTGATTCAGTTGTGGTGCAAAGAGAGCAAATGGATCATAACGAACTGTGGTATTTCGGAATCTTTGATGCTGTAGTTGGAGATTGCGTTACCAAGTTCATGCAGTCCAATTTCTTCAACAAGAAGCTTCAAGAGTCTCATATAAGGAGGAAAAGTAAGGAAACACTGAAGAGAGCATACCTCGGTGCAAGGGCGAAGATAAGAGAGGAATATGAATCAGATGAAAGGAGCAGAATGGGTGCAGGATCATGTGTTATGGTGATAAATGGAGAGAAGCTTGTGATAGCAAACATGGGAGATTACAGAACTGTTGTCTGCAGAGATGGCATAGCTCATCATTACACATCATCCGGCAGACACCACCAACATTCATCGAAAACACATTGGTCTCGCAGACTCTTTCCAGGTAAAAGTCATTCTAGAGGCTCAGAACTTGTTGTCAAAGGAGAAAGGATTGATTCAGATACCGAGTTTCTGATATTGGCCAGCAATGGTATCTGGGAGGTGATGCAGAACCAAGAGGCAGTGAATCTGATAAGCCACATAGAGGATCCACAAGAAGCAGCAGAATGCTTGGCAAAGGAAGCTATGAATAGGATGAGCAGAAGCAACATCTCATGCTTAATCATTCGCTTTGAATGA 834 0.4353 MGLKYLPLKLKVFRLKRFLLGRGGRGVKRKHVMMPAKKPSWMMPVTHGYYVVEHHQGSEKDVLNFDSVVVQREQMDHNELWYFGIFDAVVGDCVTKFMQSNFFNKKLQESHIRRKSKETLKRAYLGARAKIREEYESDERSRMGAGSCVMVINGEKLVIANMGDYRTVVCRDGIAHHYTSSGRHHQHSSKTHWSRRLFPGKSHSRGSELVVKGERIDSDTEFLILASNGIWEVMQNQEAVNLISHIEDPQEAAECLAKEAMNRMSRSNISCLIIRFE 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151130g00007 277 ProSiteProfiles PPM-type phosphatase domain profile. 64 276 IPR001932 -
Stsc151130g00007 277 Gene3D - 38 277 IPR036457 -
Stsc151130g00007 277 MobiDBLite consensus disorder prediction 180 199 - -
Stsc151130g00007 277 Pfam Protein phosphatase 2C 74 180 IPR001932 -
Stsc151130g00007 277 Pfam Protein phosphatase 2C 215 269 IPR001932 -
Stsc151130g00007 277 CDD PP2Cc 64 276 IPR001932 -
Stsc151130g00007 277 SMART PP2C_4 45 274 IPR001932 -
Stsc151130g00007 277 PANTHER PROTEIN PHOSPHATASE 42 276 IPR015655 GO:0004722|GO:0006470
Stsc151130g00007 277 SUPERFAMILY PP2C-like 46 276 IPR036457 -
Stsc151130g00007 277 MobiDBLite consensus disorder prediction 180 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151130g00007 Stsc-Chr151130 29313 30956 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151130g00007 1 276 PP2C-type Phosphatase Gene Family AT3G23360 47.719 1.61e-82 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151130g00007 K19704 - gmx:100794054 344.739