Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151129g00011 ATGAGGGACAAATTGACTACGTTTATTCTGAAAAACCCTCCCGAAACAAAGAAAGGATCCAAAGACAAGAAGGCCGTGAGAAGAGCTGAGAAGGAGAGGTTGAAGGAAGGTGAAATGGCTGATGAGGAGCAGAAGAAAATCAAGGAGGTAAAGAAGAAAGTCTCTTCCACTTCCAAGGATGGCATTATAAAGTCAACCACTAAGAAGAAGGCAAGTACCTCAGATGATGACCGTATATCGCCTACTCACAGTCAAGTGGAGGAGAAAGAAGATGCTTCTCAGGAAGAGGAAGAGGATGATGACATCCAATGGCAAACAGATGCATCTCTGGAGGCGGCTCGCCAACGCATCCAAGAACAATTAAGTGCTGTAACAGATGATATGGTCATGCTCTCCACAAATGAGCCTGAGAAGAATGGAAAAATAACAAGCAAGGAAAGCAATGGTTCTGAAAATGGTGGCTCACATGACTACAGCACACTTGTTGGAGAAGTGAAGGCAATTTTGAATAAAGGTGTTGCAAAGGAGAATAGTTAG 537 0.4339 MRDKLTTFILKNPPETKKGSKDKKAVRRAEKERLKEGEMADEEQKKIKEVKKKVSSTSKDGIIKSTTKKKASTSDDDRISPTHSQVEEKEDASQEEEEDDDIQWQTDASLEAARQRIQEQLSAVTDDMVMLSTNEPEKNGKITSKESNGSENGGSHDYSTLVGEVKAILNKGVAKENS 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151129g00011 178 MobiDBLite consensus disorder prediction 1 111 - -
Stsc151129g00011 178 MobiDBLite consensus disorder prediction 15 90 - -
Stsc151129g00011 178 MobiDBLite consensus disorder prediction 132 158 - -
Stsc151129g00011 178 Coils Coil 40 60 - -
Stsc151129g00011 178 MobiDBLite consensus disorder prediction 91 105 - -
Stsc151129g00011 178 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 175 IPR045196 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151129g00011 Stsc-Chr151129 85807 86343 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151129g00011 1 172 Eukaryotic Initiation Factors Gene Family AT1G77840 51.705 8.00e-31 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151129g00011 K03262 - gmx:100777906 215.312