Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151129g00010 ATGGCCTTGCAAAACATTGGTGCTGCAAACAGTAATGATGCCTTCTATAGGTATAAGATGCCCAAAATGATTACCAAAATCGAGGGTAGAGGGAATGGCATTAAGACAAATATTGTCAATATGGTTGATATTGCCAAGGCATTGGCAAGGCCAGCCTCTTATACAACCAAATACTTTGGGTGTGAGCTTGGAGCCCAGTCAAAGTTTGATGAGAAATCTGGTACTTATCATGTTAATGGGGCGCACGACACTGCAAAACTTGCTGGCCTTATTGAGAACTTCATCAAGAAATTTGTTCAATGTTATGGTTGTGGAAACCTGCGGAGATATTGA 333 0.4114 MALQNIGAANSNDAFYRYKMPKMITKIEGRGNGIKTNIVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKSGTYHVNGAHDTAKLAGLIENFIKKFVQCYGCGNLRRY 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151129g00010 110 SMART eIF2Bneu4 15 110 IPR002735 GO:0003743|GO:0006413
Stsc151129g00010 110 Pfam Domain found in IF2B/IF5 10 106 IPR002735 GO:0003743|GO:0006413
Stsc151129g00010 110 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 10 101 IPR016189 GO:0003743|GO:0006413
Stsc151129g00010 110 FunFam Eukaryotic translation initiation factor 5 1 104 - -
Stsc151129g00010 110 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 106 IPR045196 GO:0003743|GO:0006413
Stsc151129g00010 110 Gene3D - 2 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151129g00010 Stsc-Chr151129 85412 85744 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151129g00010 1 106 Eukaryotic Initiation Factors Gene Family AT1G36730 85.849 4.68e-65 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151129g00010 K03262 - pop:18097660 210.69