Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151129g00005 ATGCACAGCATTCCAATGATTTCACACTCCATAGCCATATCCAAGTTTCCTCACCCATTTTCTTCTTCTTATTCTTCTTCTTTACCACACACCCTTAGCTTCACCATCAATGGAGGAGGAGGACCCTTCTTATCATACCCATTACAAAAGTCACCTTCTTTTCTCATTTCAGCTCCAAAGATTCAATCTTTGAGGGTTTTGGCTGCTGCTTCTGTTCCTGAAGCTAAGAGTGATGAACCTATCAAACCAGCTGGTTTAATTCAAACCCTTCAGCTTGGAGCCATGTTTGGAACTTGGTACCTCTTGAACATTTACTTCAACATCTACAACAAACAGGTTCTAAAAGTCTATCCATTTCCAGCAACAGTTACAGCATTTCAATTTGGCTTTGCTTCATTGATGATTAACTTGATATGGAGTCTTAATCTGCATCCCAGACCAAACATAACTCGTTCACAGCTTGTAGCAATTCTTCCACTGGTTGTGGCTCATACCATGGGGAATCTTCTAACCAACATTAGTCTTGGCAAGGTTGCTGTATCTTTCACTCACACCATTAAAGCTATGGAGCCCTTTTTCACTGTTCTTCTTTCCTCTCTCTTCCTTGGTGAGATGCCGAATTTTGTGGTGGTTTCTTCTCTCGTACCGATAGTAGGAGGAGTAGCACTGGCATCAATGACTGAACTCTCCTTCAATTGGATTGGCTTTGCTACTGCTATGGCATCTAACCTTACTAACCAGTCGCGGAATGTTTTGAGCAAGAAACTCATGGTCAATGAAGAGGAAACTTTGGACAATATCAACCTCTACTCTTTGATAACCATCATTTCCTTTTTCCTTTTGGTTCCATTTACTATATTCTTGGAAGGCTTCAAGTTTACTCCGTCGTACCTGCAATCTGCTGCATGCCAAGGATTGAATGTTAGAGAGCTATGTGTGAGATCAGTTTTGGCGGCGTTCTGTTTCCATGCATATCAGCAGGTATCTTATGGAATATTACAAATGGTGTCACCTGTGAGCCACTCAGTAGGGAACTGTGTGAAGCGCGTGGTTGTCATCGTCTCCTCAGTTATCTTCTTCCAAATTCCTCTCGCCCCGCTCAACATGCTCGGAACTGGTGTTGCACTTGTTGGAGTTTTCTTGTATTCAAGGGCGAAGCAGATAAAGCCAAAGCCACACACTAAAGCTGCATAA 1194 0.4246 MHSIPMISHSIAISKFPHPFSSSYSSSLPHTLSFTINGGGGPFLSYPLQKSPSFLISAPKIQSLRVLAAASVPEAKSDEPIKPAGLIQTLQLGAMFGTWYLLNIYFNIYNKQVLKVYPFPATVTAFQFGFASLMINLIWSLNLHPRPNITRSQLVAILPLVVAHTMGNLLTNISLGKVAVSFTHTIKAMEPFFTVLLSSLFLGEMPNFVVVSSLVPIVGGVALASMTELSFNWIGFATAMASNLTNQSRNVLSKKLMVNEEETLDNINLYSLITIISFFLLVPFTIFLEGFKFTPSYLQSAACQGLNVRELCVRSVLAAFCFHAYQQVSYGILQMVSPVSHSVGNCVKRVVVIVSSVIFFQIPLAPLNMLGTGVALVGVFLYSRAKQIKPKPHTKAA 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151129g00005 397 Pfam Triose-phosphate Transporter family 90 383 IPR004853 -
Stsc151129g00005 397 PANTHER SOLUTE CARRIER FAMILY 35 91 387 - -
Stsc151129g00005 397 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 90 392 IPR004696 GO:0016020|GO:0022857|GO:0055085
Stsc151129g00005 397 SUPERFAMILY Multidrug resistance efflux transporter EmrE 133 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151129g00005 Stsc-Chr151129 49302 52422 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151129g00005 68 394 Antiporters AT5G33320 64.526 3.77e-143 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151129g00005 K15283 - gmx:100819280 553.903