Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151128g00010 ATGACGGTTCCACCACCACCCTCGCCGGAACTTGATCTCGACAACCTCAAAGCACTCAAAATTCTAGGCAGAGGCGCCATGGGCACCGTCTTCCTCGTCCAACACACCACCACCTCCACCCAACTTGCACTCAAAGTCGTCCACAACGCAAACCCAGACTCCAACCGCCGTGCCCGATGGGAAACCCAAGTCCTCTCCCGCCTCTCCCACCCCTTCCTCCCTTCCCTCCTCGGCACCTTCGAAACAGATCACTTGCTCGGCTGGGCCGTCCCTTACTGCCCCGGCGGCGACCTCAACGTCCTCCGCCACCGCCAAGTCGACCGCGTCTTCTCCCCCGCCGTCATCCGCTTCTACGTCGCCGAGATCCTCTGCGCTCTCGACCACCTCCACTCGATCGGCATCGCCTACCGAGACCTCAAACCTGAAAACGTACTTATACAACAAACCGGCCACGTCACCCTAACTGATTTCGACCTCTCACGCAACCTCACTCCCCCAAAACAGAAAACGGTTACAAACCTTATTACAGATCCCAAGGCCTCTAACAGAAAACATGACACGTGTCACCGCCAGAGCCAACAAAAAGGACTGAAGAAAACCAAGTCCGCTAGAGTCAGTCCTGTTAGTCGTCGCAGGCCTAGTTTCTCCGCCGGAGAAAGGTCGAACTCCTTCGTCGGTACGGAGGAGTACGTGGCTCCGGAGGTGGTGCGCGGTGACGGCCACGAATTCTCCGTCGATTGGTGGGCACTAGGGGTGCTGACGTACGAAATGCTGTACGGAACGACGCCGTTTAAGGGGAAGAACAGAAAGGAGACATTTCGGAACGTGTTGATGAAGAAGCCTGAGTTCGTTGGGAAGCAGACGGTGTTGACGGATTTGATCTCGCGGTTGCTGGAGAAGGAACCTTCTAGAAGGTTGGGTTACGTTGGTGGGGCGAGTGAGATCAAGGACCATGAATTTTTCAGAGGTCTTAAGTGGGACCTCCTCACGGAGGAGGTGGCTATGAGGCCGCCGTTTATTCCGTCCAGAGATGATGACGGCGACTTCGCGGAGAAACTGACCGGTGCAGCGGGTGACTCTGAAGGAGTGGACATAAGGGATTACTTCCAGAGGTTGAAGGCGCCGTCGCAGTCACCATCAGCCTCCCCTTCTAGAGAGCTTCACCAGAAGAATGTTTCGTGGACAGAATTCTGA 1194 0.5603 MTVPPPPSPELDLDNLKALKILGRGAMGTVFLVQHTTTSTQLALKVVHNANPDSNRRARWETQVLSRLSHPFLPSLLGTFETDHLLGWAVPYCPGGDLNVLRHRQVDRVFSPAVIRFYVAEILCALDHLHSIGIAYRDLKPENVLIQQTGHVTLTDFDLSRNLTPPKQKTVTNLITDPKASNRKHDTCHRQSQQKGLKKTKSARVSPVSRRRPSFSAGERSNSFVGTEEYVAPEVVRGDGHEFSVDWWALGVLTYEMLYGTTPFKGKNRKETFRNVLMKKPEFVGKQTVLTDLISRLLEKEPSRRLGYVGGASEIKDHEFFRGLKWDLLTEEVAMRPPFIPSRDDDGDFAEKLTGAAGDSEGVDIRDYFQRLKAPSQSPSASPSRELHQKNVSWTEF 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151128g00010 397 MobiDBLite consensus disorder prediction 374 397 - -
Stsc151128g00010 397 Gene3D Phosphorylase Kinase; domain 1 16 96 - -
Stsc151128g00010 397 Gene3D Transferase(Phosphotransferase) domain 1 97 170 - -
Stsc151128g00010 397 PANTHER FLIPPASE KINASE 1-RELATED 11 344 - -
Stsc151128g00010 397 FunFam Serine/threonine-protein kinase OXI1 97 165 - -
Stsc151128g00010 397 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Stsc151128g00010 397 FunFam Serine/threonine-protein kinase OXI1 219 342 - -
Stsc151128g00010 397 ProSiteProfiles Protein kinase domain profile. 16 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151128g00010 397 MobiDBLite consensus disorder prediction 179 220 - -
Stsc151128g00010 397 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Stsc151128g00010 397 Gene3D Transferase(Phosphotransferase) domain 1 219 342 - -
Stsc151128g00010 397 MobiDBLite consensus disorder prediction 179 193 - -
Stsc151128g00010 397 Pfam Protein kinase domain 218 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151128g00010 397 Pfam Protein kinase domain 18 170 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151128g00010 397 ProSiteProfiles AGC-kinase C-terminal domain profile. 322 397 IPR000961 GO:0004674|GO:0005524|GO:0006468
Stsc151128g00010 397 SUPERFAMILY Protein kinase-like (PK-like) 8 348 IPR011009 -
Stsc151128g00010 397 SMART serkin_6 16 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151128g00010 Stsc-Chr151128 52623 53816 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151128g00010 7 375 AGC Kinase Gene Family AT1G51170 58.486 1.40e-156 445
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Stsc151128g00010 Pkinase 1.3e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151128g00010 - - cave:132163960 513.457