Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151128g00002 ATGGAGAACAACAGAACAAGAGGAAAAGCAAAAGCCAAGGAGGAGATAGGACAAAGAAATCGTCAAGTTCTTGGAGATATTGGTAACCTTGATGGCAATCACATTTCACGGCCTATCACAAGGAACTTTCATGCAAAACTGTTGGCAAATTCACAATCTAGTGCAAATGTAGTGTCTTCAAAAGCCCAAGCTAATGAACAAGGAGCTACACAGGGTAACGAGAACTTTGTTCAACCTGAATCAGACATTACAACAAGTGTTCGCAACAAGAAACATGGTTTAGAGGAAAGTGTTGAGCTCCAAAATGAAGAAAGGTTTAAGAAAAGATCTTGTAGGAAGGATATTACTCTAAATGAAGAAATCACTGCACAGAGCAAGGCTGCTCAGGATATCTCATCTGAGCCTGAAGATGAGCATGTTGACATCAATGCAGACAATGGTGATGTTGATTTGCAAGTGGCAGAGTACCTTGATGATATATATGAATTCTATAAGCTAACAGAAGATAAGAGTCGGGTTCCAGATTACATGAACTCGCAGAACGAAATCACTGAGAATATGAGGTTAATTACTGTGGACTGGCTCGTTGAAGTGCACTGGAGATTTAACCTAATGCCTGAGACACTCTTTCTCGCCATAAACATAATCGATCGCTACCTCTCAATGTCAGTTGTACCAAAAGCAGAATTGCAGTTGGTGGGCATTTGTGCCTTGATCATAGCTTGCAAATATGTAGAGATACTTTATCCTCAGGTTAAGGCCTTTGCTAAACTATCAAACGATGCTTACACCAAAAAACAGATAGAAATCATGGAAATTGCAATCCTTGACAAGATAGAATGGTATCTAGCAGTTCCCACACCCTATGTCTTCTTACATCGATTCATCAGAGCTTCAGAGCAGTTAGATCTTGAGCTGGAAAACATGATTTTCTTCCTGGCTGAACTTGGTCTTATACACTATCAAAATGCTCTATACTGCCCCTCATTGATAGCCGCAGCAACTATGCTTGCTGCGCGTTATGCACTCAATCGGAATCCATTCTGGACTGAAATTCTAAAGCTCAGGACTGGCTATGTTGCAGAACAGATAATGTAA 1098 0.4044 MENNRTRGKAKAKEEIGQRNRQVLGDIGNLDGNHISRPITRNFHAKLLANSQSSANVVSSKAQANEQGATQGNENFVQPESDITTSVRNKKHGLEESVELQNEERFKKRSCRKDITLNEEITAQSKAAQDISSEPEDEHVDINADNGDVDLQVAEYLDDIYEFYKLTEDKSRVPDYMNSQNEITENMRLITVDWLVEVHWRFNLMPETLFLAINIIDRYLSMSVVPKAELQLVGICALIIACKYVEILYPQVKAFAKLSNDAYTKKQIEIMEIAILDKIEWYLAVPTPYVFLHRFIRASEQLDLELENMIFFLAELGLIHYQNALYCPSLIAAATMLAARYALNRNPFWTEILKLRTGYVAEQIM 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151128g00002 365 MobiDBLite consensus disorder prediction 124 143 - -
Stsc151128g00002 365 Gene3D - 173 284 - -
Stsc151128g00002 365 PIRSF Cyclin_A_B_D_E 1 365 IPR046965 GO:0016538|GO:0044772
Stsc151128g00002 365 Gene3D - 159 364 - -
Stsc151128g00002 365 SMART cyclin_7 290 365 IPR013763 -
Stsc151128g00002 365 SMART cyclin_7 193 277 IPR013763 -
Stsc151128g00002 365 SUPERFAMILY Cyclin-like 152 281 IPR036915 -
Stsc151128g00002 365 PANTHER CYCLINS 119 344 IPR039361 -
Stsc151128g00002 365 Pfam Cyclin, N-terminal domain 159 283 IPR006671 -
Stsc151128g00002 365 Pfam Cyclin, C-terminal domain 286 365 IPR004367 -
Stsc151128g00002 365 FunFam G2/mitotic-specific cyclin 172 284 - -
Stsc151128g00002 365 SUPERFAMILY Cyclin-like 285 364 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151128g00002 Stsc-Chr151128 8969 11989 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151128g00002 7 365 Core Cell Cycle Gene Families AT3G11520 42.162 5.60e-94 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151128g00002 K21777 - jre:109013760 333.183