Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151127g00013 ATGAGCTTGCTGCTTAATCACGTATCAGTGTTGCCACATGAGGCTGTAACATTAGCAAGCTTTCATTCCTTTTCTGCAACTTGTTCTGTCACCAATAGAGCACTCCATGCCACCCCAGAAAGGTGTAGATGCAATGGTAGTTGTATTAGTATTAGAAGTAGTAGTTGTTGTTGTTGTTTCACTTTCAGGGGATGCAGGTACAAGGGGAAAAGGCTTGTTAGAAGCTGCTCCACGACCAGTGACTTTGTAATTGCTGGTGACGAAAGTTATGGCAACAAGCAGGTTGTTAGTCTCACTCCTCGCTTGTATGACTATGTCCTCAAAAATGTTAGAGAGCCTGAGATTTTAAGGCTACTGCGAGAGGAGACGGCCTCTATGCGTGGAAGTCAAATGCAGGTATCTCCTGATCAGGCACAACTACTTGCAATGCTTGTGCAGACTCTTGGAGCTGAACGGTGCATTGAAATCGGTGTTTATACTGGTTACTCATCACTTGCCATAGCATTAGTCCTGCCAGAATCAGGTTGTTTGGTTGCTTGTGAAAGAGATGCCAAATCTCTTGATATCGCGAAGAAGTACTATCACCTAGCTGGTGTTTCACATAAGGTGGATGTAAAACTTGGACTTGCAGCAGATTCCCTAGAATCTTTAATATTGAATGGTGAATCAAGCAGCTATGATTTTGCATTTATTGATGCTGAGAAAAGGATGACTGAGAAATATTTTGAACTGCTACTGCAACTGGTGAGGGTTGGAGGTCTTATAGTAATTGATAATGTTCTTTGGCATGGGAAAGTTGCTGATCCACTGGTAAATGACCCAAAAACTATCAGCATTAGAAATTTCAATCAAAGGTTAATGGAAGACAAGCGCGTAAGCATAAGTATGGTACCTATTGGAGATGGGATGACAATATGCAGAAAAAGATGA 930 0.4183 MSLLLNHVSVLPHEAVTLASFHSFSATCSVTNRALHATPERCRCNGSCISIRSSSCCCCFTFRGCRYKGKRLVRSCSTTSDFVIAGDESYGNKQVVSLTPRLYDYVLKNVREPEILRLLREETASMRGSQMQVSPDQAQLLAMLVQTLGAERCIEIGVYTGYSSLAIALVLPESGCLVACERDAKSLDIAKKYYHLAGVSHKVDVKLGLAADSLESLILNGESSSYDFAFIDAEKRMTEKYFELLLQLVRVGGLIVIDNVLWHGKVADPLVNDPKTISIRNFNQRLMEDKRVSISMVPIGDGMTICRKR 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151127g00013 309 Gene3D Vaccinia Virus protein VP39 85 309 IPR029063 -
Stsc151127g00013 309 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 106 309 IPR029063 -
Stsc151127g00013 309 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 92 309 IPR002935 GO:0008171
Stsc151127g00013 309 PANTHER O-METHYLTRANSFERASE-RELATED 92 308 - -
Stsc151127g00013 309 CDD AdoMet_MTases 152 257 - -
Stsc151127g00013 309 Pfam O-methyltransferase 110 308 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151127g00013 Stsc-Chr151127 69343 72647 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151127g00013 70 297 Monolignol Biosynthesis Gene Families AT3G62000 76.957 1.17e-131 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151127g00013 - - gmx:100776619 461.84