LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc151126g00019	ATGGAATCTCCAAATCTCCATCATCAACATCAACACCCTCCTCCTCCTTCTTCTTCTTCCTCATCATCGTCATATGGATCCACCACCCACCACTCTTGGCCTCCAAATAATAATATCACTTTTAGTCATATCCAAGAGGATATTAATAATAATCTGAGATGGAGAGGAGGTACTTTAAGAGATCATTATCATCATGTTGGGGTCCCTCTGATCCAAGATCATCACTTATGTAGTAGTGATGATAATTCTGCACAACAAAGTTGCTTAACCTTAAACACCACCAACAACCACATGCTAAACTCTCACACACATACACATACACCTCCTTCAACACAACAAGATAAGCTCTTGCTCAAGACATTTTTGTCTGCACAAGATTTGATCGATTCCAATAACATTACTACTACTACTTTCTGTGGTAGTAGTAGAAGAAATTTTAGTCACATTTATCCCACCATAAATATCTCTAATAACATGAACAACCACTCACCATCATCATCTCCTAATAATAATATGATGATGATGATGACTTCACACTCCTCCTTGGATCTACCAGCTTTCATGACTACTGCTTCACATCATCAACAAGTAGATCTTGGTCTTGCTACATTTTCAGACAACCTTTCTTTCTCGCCGCCGCCGCCCTGTAGTAACTCTACTACTACTACTAATAAGGATCCATCACAATACTTCTCCAATGGCACTACTACTATTGTGGACACAACAAAGAGACCCTGCACTTCCATCATCGATGATACAAAGCCTTCTCAGTCTCTAACAGCATCCAAGAAATCAAGATCCGAATCACGCCCCTCATGCCCTCCCTTTAAGGTTAGGAAAGAGAAATTAGGAGATAGGATTGCGGCTCTCCAACAGTTGGTGGCTCCTTTTGACAGACACTGCATCCGTACTTATGGAAGCAATTGGATACATCAAATTCCTTCAAAGCCAAGTAGAGACACTGAGCGTTCCATACATGAAGCCATCACAGAACCAAACCAAGACCAGAATCATGCAAGGGGCATAGGCGGTGGCGGAAATGGGGAACCGAAGCAAGACCTTCGAAGCCGAGGCCTGTGTCTGGTGCCATTGTCGTGCATGTCTTACATAGCAGGTGATGGCAGCAATGACACGTGGCAACAATCAAACTTTGGAGGATCAACTTAA	1167	0.4233	MESPNLHHQHQHPPPPSSSSSSSSYGSTTHHSWPPNNNITFSHIQEDINNNLRWRGGTLRDHYHHVGVPLIQDHHLCSSDDNSAQQSCLTLNTTNNHMLNSHTHTHTPPSTQQDKLLLKTFLSAQDLIDSNNITTTTFCGSSRRNFSHIYPTINISNNMNNHSPSSSPNNNMMMMMTSHSSLDLPAFMTTASHHQQVDLGLATFSDNLSFSPPPPCSNSTTTTNKDPSQYFSNGTTTIVDTTKRPCTSIIDDTKPSQSLTASKKSRSESRPSCPPFKVRKEKLGDRIAALQQLVAPFDRHCIRTYGSNWIHQIPSKPSRDTERSIHEAITEPNQDQNHARGIGGGGNGEPKQDLRSRGLCLVPLSCMSYIAGDGSNDTWQQSNFGGST	388

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc151126g00019	388	MobiDBLite	consensus disorder prediction	210	269	-	-
	Stsc151126g00019	388	MobiDBLite	consensus disorder prediction	1	38	-	-
	Stsc151126g00019	388	MobiDBLite	consensus disorder prediction	12	38	-	-
	Stsc151126g00019	388	MobiDBLite	consensus disorder prediction	210	278	-	-
	Stsc151126g00019	388	MobiDBLite	consensus disorder prediction	314	354	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc151126g00019	Stsc-Chr151126	78498	82201	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc151126g00019	143	369	Basic Helix-Loop-Helix Transcription Factor Gene Family	AT1G27660	36.187	1.86e-23	99.8

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc151126g00019	-		-	aip:107610095	353.984