Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151126g00013 ATGGCTTCATCAAGTGGAAACTCGATCGTTCAAAGCTCAGGTTCAGAGGAGGATATGTTGATGATGATGATGGTGGATGAAAGGAAGAAGAAGAGGAAGCAATCAAATAGAGAATCAGCAAGAAGATCAAGGATGAGGAAGCAGAATCACATGGATGATCTGATGAATGAGGTGTGCAAGCTTGGAAAAGAAAAAGATGAAATCATGAAAGGCATAGAAGTAACCACACAACAATATTTGTGTGTTGAGTCTCAGAATTCAATCCTCAGGGCCCAGTTGCAAGAACTCACTCAAAGGCTTCAATCTCTCAATCAAATCATTCATCTCATCAACACAACACCACCTAATAATGTGCTCTATAATCAATATGATGATGATTATCTTCTGCCAGAAAATTTGTTCATGAATATGAATATGTTCAATCATGTGAAGCAACCAATTTCGGCTTCTGCAGACATGTTATATCAGTGGGTCAATTGA 480 0.3833 MASSSGNSIVQSSGSEEDMLMMMMVDERKKKRKQSNRESARRSRMRKQNHMDDLMNEVCKLGKEKDEIMKGIEVTTQQYLCVESQNSILRAQLQELTQRLQSLNQIIHLINTTPPNNVLYNQYDDDYLLPENLFMNMNMFNHVKQPISASADMLYQWVN 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151126g00013 159 FunFam BZIP transcription factor 26 77 - -
Stsc151126g00013 159 SUPERFAMILY Leucine zipper domain 28 82 IPR046347 GO:0003700|GO:0006355
Stsc151126g00013 159 Gene3D - 26 108 - -
Stsc151126g00013 159 Coils Coil 86 113 - -
Stsc151126g00013 159 Coils Coil 37 57 - -
Stsc151126g00013 159 CDD bZIP_plant_GBF1 29 79 IPR045314 GO:0003700|GO:0006355
Stsc151126g00013 159 PANTHER BZIP TRANSCRIPTION FACTOR 44 12 152 - -
Stsc151126g00013 159 SMART brlzneu 24 88 IPR004827 GO:0003700|GO:0006355
Stsc151126g00013 159 MobiDBLite consensus disorder prediction 25 52 - -
Stsc151126g00013 159 Pfam bZIP transcription factor 28 73 IPR004827 GO:0003700|GO:0006355
Stsc151126g00013 159 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 31 46 IPR004827 GO:0003700|GO:0006355
Stsc151126g00013 159 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 26 89 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151126g00013 Stsc-Chr151126 55347 55826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151126g00013 24 154 bZIP Transcription Factor Family AT4G34590 46.099 5.63e-31 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc151126g00013 bZIP_1 5.2e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151126g00013 K25786 - adu:107460079 226.483