Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151125g00010 ATGAAAATGCTAAGAGGGGTGAACAGGATTAACACTCAGACACGCGCACACACAATTTTATGGTTTGGACTTCAGTGTGTAGCATCACACCCTGATACAAGGATGTTGTTCCTCAATGCTCATATACCTCTATATCTGTATCCCTTCCTTAATACAACCAGCAAATCGCGACCATTTGAATACTTGAGACTCACCAGTCTTGGCGTCATTGGTGCTTTGGTGAAGGTTGATGATACGGAAGTCATAAGTTTCCTTCTTTCAACTGAGATAATTCCATTGTGCCTACGCACCATGGAAATGGGCAGTGAACTATCAAAAACAGTTGCAACTTTTATTGTTCAGAAAATCCTATTAGATGATGTGGGCTTGGATTATATTTGCACTACAGCAGAGCGTTTCTTCGCAGTAGGTCGTGTTTTAGGAAACATGGTGGCAGCTCTTGCTGAGCAGCCCTCATCTCGATTGTTAAAGCATATCATCAGATGCTATCTTCGCCTGTCAGATAATCCAAGGGCTTGCGATGCATTAAGAAGTTGTCTTCCAGACATGTTAAGAGATGCTACTTTCAGCAACTGCCTTCGCGAGGACCCTACAACCAGGAGGTGGCTAACACAATTACTTCACAACGTCGGCGTGAGTCGGGTGCCTGCCCTCCAAGCTGGAGGAGGCTTCGACCATATGATGGTGACATGA 693 0.4473 MKMLRGVNRINTQTRAHTILWFGLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDATFSNCLREDPTTRRWLTQLLHNVGVSRVPALQAGGGFDHMMVT 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151125g00010 230 Pfam Cell differentiation family, Rcd1-like 24 210 - -
Stsc151125g00010 230 Gene3D - 9 213 IPR011989 -
Stsc151125g00010 230 PANTHER UNCHARACTERIZED 24 213 IPR007216 GO:0006402|GO:0030014
Stsc151125g00010 230 SUPERFAMILY ARM repeat 58 210 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151125g00010 Stsc-Chr151125 86069 89856 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Stsc151125g00010 Rcd1 3.6e-95 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151125g00010 K12606 - gmx:100784529 407.912