Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151124g00026 ATGGCAGATACTGTGATTTCTTTCGTCCTAAATAACTTGTCCCAACTGATAGCAAACGAAACCAATCTGCTGTGTGGCTTGGATGACAAGGTTAAGTCCCTTCAAAGTGAGCTTAGCATCATCAACGTGCATCTCAAAACCTTTGAAGGGAAAATCAAGAAAGAAATAGAGAAAGAAGTTCTTCGCCAGATCAGAGATGCTGCGCATGAAGCTGAGGATGTCATCGACACCTTTGTTGTCAAAGTGGCTATGTACAAGCGTAGAAACAAGCTGGGGAGGATGCTCCATGGTCTTGAACATGCAAAGTTGCTCCATGATGTTGCTGAGAAAATAGACACCATCAAAGCCACTGTAAATGAAATAAGAGACAACAAGCTCAAGTTTGCCGATATCTTCGAGCCGGAAGGTGAATCATCATCTTCCGCAATACAGGATGAGCAGAGGATGCTGTTGATGCACAAGAAGAGGACAAATGTGGAGGAACATGATGTAGTTGGTTTTGTTCGTGAATCCAAGGCAGTCATCAAGCTGCTTAAGGAAGAGAGTTCCCAAAGCAATGTCGTCTCCATCATCGGTATGGGTGGGTTGGGCAAAACCACCCTTGCTCGAAAGGTCTATGAATGCAATGAGGTGAAGTCATATTTCAATTGTCATGCATGGGTTTATGTGTCAAATGAGTGCAGAGTTGAAGAGCTTTTGCTTGGCCTCATCAAGTGTTTGATGCCTAACCTTGATGAATACAACCATGGGAGGAAAAGGAAAGGAAAGAAACAAAAGGGAATAGAGAAACCAGGTGACCTGCCTAGCTTGGGTGTGGATGAACTCAAGCTCTTGGTGCGTGATTTCCTGAGCATGAAAAGGTATTTGGTAGTCCTTGATGACCTCTGGAAGACTCAAGACTGGGATGAGATACAAGATGCTTTTCCAAACCACAATAATGGCAGTAAAATACTAATTACTAGCCGTTTGAAAGAAGTGGCATTGCGTACGAGTTCGTGTCCTTATTATCTTCAATTTCTCAGTGACGATGAAAGCTGGAAACTCTTTTCAAAGAAAGTGTTTCGTGGAGAAGAGTGTCCTGTGGATCTTGAGCATCTTGGCAAGCAAATGGTGAAAAGTTGTGGGGGTTTGCCACTCTCCATTGTTGTTTTGGCAGGGTTGCTGGCAAACAAGGAGAATCCACACAGGGAATGGTCCAGAGTTGTGGGACATGTCAACTCCTATCTTACTCGAGAAGATAAGACCCAAGTGAAGGACATTGTACTCAAACTCAGCTACGACAACTTGCCTACAAGGTTAAAGCCATGCTTTCTGTATTTGGGGATGTACCCTGAAGATTTTGATATCCCCGTATGGTCATTGCTGCAAAAATGGGTTGCTGAGGGATTTATTCAACAAGCTGGGACCAGAGATTCGGAGGATGTTGCTGAAGATTACCTGTATGAGCTCATTGATCGTAGCTTGGTTCAAGCATCGCGAGTAGATGTTAACGGAGATGTGATGGGATGTCGCATCCATGATCTTCTTCGAGATCTATGCATATCAGAGAGCAAAGAGGCCAAGCTTTTTGAGGTTTGCACAAACAATATCATTTTGGAGAGATCAAAACCTCGCAGGCTGTCTATCCAATGCGGCATGGATAGCTATGTTTCTTCAAGCAACAATGACCATTCATGTGTCCGCTCTTTGCTTTGGTTTGACCCAAGAGAGCGTGATGGTTCCCCCTGTGAGTGGAAATGGGTTTCAAAGAAGTTCAATTTGGTTCGGGTATTAGATCTTAGCTACAACCATTTCAACAAAGTCCCGTCCAACTTGGGCTTATTTATCCATTTAAGGCATATCGATACTGATGGAATCACCATGGTCCTACGTGGCGAGCATAGTTCAAAAGCAGAAGATAAAGTTATGTGGAATCTTCAAACCATTTCTTCCATTAAATTCAGTAGACAGATTGCATGGATGTTAGAGAAAGGAAGGTTTCCCAGGCTACGAAAGTTGGGTTTGAAAATCTACTTGGCCGATAAAGATAAAGTGCATGAGCTGTTGTCATGCCTACAACGATTAACTCATCTGCACAAGTTAAAGCTTTTCTTGCCATTGAAGAGATATAAGACCTGCCGCCCAATGCCCTCAAACTACAAGCAGATGAAATGGCGCAATGGTTGGAAGCCAATTGAATTGTTACAGAGCCTGCAGCACTTGTCAAATCTAACAACATTAGAAGTTTACGGAGCCTTGGACCTTCCAACGTGTGGTATTGCATTTCCTGCATGCATTACAAAATTAGCGTTGATACACATTAGCTTCATGAATGATGATGGGATGAATGCCATTGGTAATCTTACTACACTCCGACTTTTGACATTGTTTGGAAATGTTGAAGTTGGAGATGTTGAAGTTGATGATTCCTTCGAGATTAATTGCAATGCCGGCAGTTTCTCACAGCTCCAGGTTTTTGAGATGAAGTGGCTGAACGTTAACAAGTGGAAATTAGGGAATGGTGCAATGCCATGTCTTCAAACACTGCTTATCAAAAGCTGTAAAAGATTGGAGAGTCTCCCAGATGAAGTGTGGGCTTTGAATTCCCTGAGACAAGTACAAGTTGTCAGACCCTCCCAAGCATTGTCTCTTGCACTAGGAAATTTGGAAATGAAGGATGGATGTGACCTCATAATAACAGAGCTGTAA 2688 0.4293 MADTVISFVLNNLSQLIANETNLLCGLDDKVKSLQSELSIINVHLKTFEGKIKKEIEKEVLRQIRDAAHEAEDVIDTFVVKVAMYKRRNKLGRMLHGLEHAKLLHDVAEKIDTIKATVNEIRDNKLKFADIFEPEGESSSSAIQDEQRMLLMHKKRTNVEEHDVVGFVRESKAVIKLLKEESSQSNVVSIIGMGGLGKTTLARKVYECNEVKSYFNCHAWVYVSNECRVEELLLGLIKCLMPNLDEYNHGRKRKGKKQKGIEKPGDLPSLGVDELKLLVRDFLSMKRYLVVLDDLWKTQDWDEIQDAFPNHNNGSKILITSRLKEVALRTSSCPYYLQFLSDDESWKLFSKKVFRGEECPVDLEHLGKQMVKSCGGLPLSIVVLAGLLANKENPHREWSRVVGHVNSYLTREDKTQVKDIVLKLSYDNLPTRLKPCFLYLGMYPEDFDIPVWSLLQKWVAEGFIQQAGTRDSEDVAEDYLYELIDRSLVQASRVDVNGDVMGCRIHDLLRDLCISESKEAKLFEVCTNNIILERSKPRRLSIQCGMDSYVSSSNNDHSCVRSLLWFDPRERDGSPCEWKWVSKKFNLVRVLDLSYNHFNKVPSNLGLFIHLRHIDTDGITMVLRGEHSSKAEDKVMWNLQTISSIKFSRQIAWMLEKGRFPRLRKLGLKIYLADKDKVHELLSCLQRLTHLHKLKLFLPLKRYKTCRPMPSNYKQMKWRNGWKPIELLQSLQHLSNLTTLEVYGALDLPTCGIAFPACITKLALIHISFMNDDGMNAIGNLTTLRLLTLFGNVEVGDVEVDDSFEINCNAGSFSQLQVFEMKWLNVNKWKLGNGAMPCLQTLLIKSCKRLESLPDEVWALNSLRQVQVVRPSQALSLALGNLEMKDGCDLIITEL 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151124g00026 895 Gene3D Ribonuclease Inhibitor 579 877 IPR032675 -
Stsc151124g00026 895 FunFam Probable disease resistance protein At5g66910 339 426 - -
Stsc151124g00026 895 CDD RX-CC_like 2 123 IPR038005 -
Stsc151124g00026 895 Gene3D - 426 516 IPR036388 -
Stsc151124g00026 895 FunFam Probable disease resistance protein At1g61300 147 332 - -
Stsc151124g00026 895 Gene3D - 339 425 IPR042197 -
Stsc151124g00026 895 Pfam NB-ARC domain 174 428 IPR002182 GO:0043531
Stsc151124g00026 895 Gene3D - 5 117 - -
Stsc151124g00026 895 PRINTS Disease resistance protein signature 374 388 - -
Stsc151124g00026 895 PRINTS Disease resistance protein signature 187 202 - -
Stsc151124g00026 895 PRINTS Disease resistance protein signature 732 748 - -
Stsc151124g00026 895 Gene3D - 142 333 IPR027417 -
Stsc151124g00026 895 FunFam Probable disease resistance protein At1g63360 426 515 - -
Stsc151124g00026 895 Pfam Rx N-terminal domain 5 86 IPR041118 -
Stsc151124g00026 895 PANTHER DISEASE RESISTANCE PROTEIN RP 51 839 IPR044974 GO:0006952
Stsc151124g00026 895 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 440 IPR027417 -
Stsc151124g00026 895 SUPERFAMILY L domain-like 495 868 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151124g00026 Stsc-Chr151124 122581 125547 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151124g00026 165 533 WRKY Transcription Factor Family AT5G45050 25.066 1.64e-09 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151124g00026 - - aip:110269956 1006.51