Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151124g00018 ATGGCTAAGCGTTCGCTTGAGGGCGAGCCGGTGAAGGAGATCTACATATGCTTTACCTTGACACTAGTCCTGGCTTGCAGCTTTGTCACGGATACCATAGGCATCCACGCGCTCTTTGGCGCATTTGTAGTAGGCGTAATTGTTCCTAAGGATGGTCCTTTTGCTGAGGTGTTGACAGAGAAGATAGAAGACATTGTAACAGGCCTTTTCTTACCACTGTATTTTGTGTCAAGTGGATTGAAGACTAATGTGGCAACTATAAGAGGAGCACTTTCTTGGGGAATGCTAGCACTAGTTATATTCACTGCTTGCTTTGGAAAGGTCATTGGCACATTCTCTGTTTCATTGTTATGTAAAGTTCCTTTTAGAGAAGCCTTGGCACTTGGATTTCTAATGAACACCAAGGGATTGGTGGAGCTCATTGTTCTCAACATCGGCAAGGATCGCAAGGTATTGAATGATCAGGCATTCGCAATATGTGTTTTGATGGCATTGTTCACCACCTTCATCACAACTCCAATAGTTATGGCAGTGTATAAGCCAGCTCGACGAGGAGTACCATACGAGCATAAAATGATCCAACGCAAGGATCCTGACACAGAGCTTCGGGTGCTAGCTTGCTTCCATAGCACCCGCAATATTCCTACATTGATCAATCTGATAGAGTCATCCAGGGGAACTAGAAAGCGAGGGAAACTTTGCATATATGCTATGCATTTGATGGAACTCTCAGAGAGACCTTCAGCCATCACAATGGTTCATAAGGCAGGCAACAATGGCCTTCCATTTTGGAACAAAATACATGATGGCAAAGATAACTTGGTCATTGCATTTCAGGCTTTTGGACACCTGAGCAGTGTCAATGTTCGCCCCATGACAGCAATCTCTTCTCTCGGTAATATTCATGAGGATATCTGCGCCAGCGCGCACCAAAAGAGAGCAGCAATGATTCTCCTCCCATTTCACAAACACCAACGCTTAGATGGGACTATGGAATCACTAGGACAGTCATTTCGGATGGTGAATAAGCAGGTCCTAAGCCATGCTCCTTGCTCAGTGGGAATTTTGGTTGATCGCGGCCTTGGAGGGACAAGACAAGTTCAAGCCAGTGATGTTTCCTACACTGTAGTGACTGCATTCTTTGGAGGACGGGATGACCGCGAAGCACTAGCCTATGGTTTGAGATTGGCAGAGCATCCCGGAATTTTGCTTACTGTCATCAAGTTTATAGCTCCACCGGGACAGACATTCACCTTTGGTGCCAAAGTGGTTGGTCTAACAGCAAACAAGGACAAGAAGGTAATAACTGTGGCTGATGGAACTACCAATGATGAAGATAAAAGAGAGGATGACCAGCTTTGGTCTGAGTTCTTAAGTGTATGCAGTAGTAGTGAAGATTGTATAGTATATGAGGAAAGGTTGGTGGAAAACAAAGATGATGTTAAAAATGTATTGAGGGAAAAGAATAGGAGCAGCCTAGTTTTGGTAGGTAGGATTCCACAAGTAGCACCTTTGGTAGACAGAAGTGATTGTTCAGAGCTTGGTCCTGTTGGAAGCTACTTGGCTTCTTCAGATTTCTCCACTTCTGCTTCTGTTATAGTGTTTCAGCAATATGATCCAAAATCAGACATTCACCCATTGGTACTGGAGGTTTCTGATTACTCTAATATGCCAGATACACCAACACATCCTTTGCAGAATTTATAG 1707 0.4411 MAKRSLEGEPVKEIYICFTLTLVLACSFVTDTIGIHALFGAFVVGVIVPKDGPFAEVLTEKIEDIVTGLFLPLYFVSSGLKTNVATIRGALSWGMLALVIFTACFGKVIGTFSVSLLCKVPFREALALGFLMNTKGLVELIVLNIGKDRKVLNDQAFAICVLMALFTTFITTPIVMAVYKPARRGVPYEHKMIQRKDPDTELRVLACFHSTRNIPTLINLIESSRGTRKRGKLCIYAMHLMELSERPSAITMVHKAGNNGLPFWNKIHDGKDNLVIAFQAFGHLSSVNVRPMTAISSLGNIHEDICASAHQKRAAMILLPFHKHQRLDGTMESLGQSFRMVNKQVLSHAPCSVGILVDRGLGGTRQVQASDVSYTVVTAFFGGRDDREALAYGLRLAEHPGILLTVIKFIAPPGQTFTFGAKVVGLTANKDKKVITVADGTTNDEDKREDDQLWSEFLSVCSSSEDCIVYEERLVENKDDVKNVLREKNRSSLVLVGRIPQVAPLVDRSDCSELGPVGSYLASSDFSTSASVIVFQQYDPKSDIHPLVLEVSDYSNMPDTPTHPLQNL 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151124g00018 568 Coils Coil 565 568 - -
Stsc151124g00018 568 Gene3D - 275 502 - -
Stsc151124g00018 568 Gene3D - 1 185 IPR038770 -
Stsc151124g00018 568 PANTHER CATION/H + ANTIPORTER 3 539 - -
Stsc151124g00018 568 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Stsc151124g00018 568 Pfam Sodium/hydrogen exchanger family 11 174 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151124g00018 Stsc-Chr151124 87633 89488 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151124g00018 1 556 Antiporter Super Family AT3G17630 65.827 0.0 749
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151124g00018 K26731 - gmx:100818975 922.154