Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc151124g00015 | ATGGGGAGATCACCAAGTGGTAGTAGTGATGAAGAGAGTGGGTTGAAGAAGGGTCCATGGACACCGGAAGAGGATAGAATATTGGTGGAATACATAAAGAAAAACGGCCATGGAAGTTGGAGAGCACTGCCTAAGATTGCAGGTTTGAACAGATGTGGAAAGAGTTGTAGGCTCAGGTGGACTAACTACCTCCGGCCTGATATCAAGAGAGGAAAGTTCTCTGAGCAAGAAGAGCAACTCATCATCAATTTACATGAAGTTCTTGGCAATAAGTGGTCAGCAATAGCAGGTCATCTGCCAGGAAGAACAGACAACGAAATCAAGAATTACTGGAACACTCATTTGAGAAAGAAGCTTCTTCAAATGGGGTTAGATCCAGTTACTCATCGTCCAAGAACAGATCATCATCATCACCTTCAACTTCTTTCAAATCTTCATCACTTGCTTCTTGCTGCAAACATTCTTAACACCACCAACAACAACAATAATAATCCTCTAATAAGCACTCTTCTATTTAACTCTGATCATGCCAAACTCCAAATCCTCCAAAACATGCTTCAAATCCTTGGCACCACTAATAATAACAACAATCTTATTGCACCAAACTTGGAGCTACTCCTTAATCAACAATTTGGTCCAATATCTTCGTCGTCGTCGTCATCAGTTCCAAATGGTTTCTATGAATCTTTAGGGTTGAATCAATCTATGATCCAAAACCTTTGTAATGTTGGTAATGATTTTTTCTTCCCATGTCAACATCAAAATCAGCCAAATTTCCAAAACTTTGAAGCTCCTAATAACAATCAGCACAACATGAATAGTAATGAGAATGAGCATAACGTTGTTGATGTCACAAATAATAATTCTTCTAATAATTCTCCTACAACACCATTGAATTATTATTCATCATCATCACTTCCAAATCTTATTTCAGCCTCATCATCACCTGATGATAAATGTCCCAACAAAGTAAATAATTATAACAATAATAATAATAATGATAATGATAATTACAACCATTGTAATAATTCTCCAAGTTCATCCAACAACTTTGAAATGTGGGCAGATTTCATGTATGAGGAAGCAAGTGATTCTTATTGGAAACACATCATAGAGTAA | 1119 | 0.3682 | MGRSPSGSSDEESGLKKGPWTPEEDRILVEYIKKNGHGSWRALPKIAGLNRCGKSCRLRWTNYLRPDIKRGKFSEQEEQLIINLHEVLGNKWSAIAGHLPGRTDNEIKNYWNTHLRKKLLQMGLDPVTHRPRTDHHHHLQLLSNLHHLLLAANILNTTNNNNNNPLISTLLFNSDHAKLQILQNMLQILGTTNNNNNLIAPNLELLLNQQFGPISSSSSSSVPNGFYESLGLNQSMIQNLCNVGNDFFFPCQHQNQPNFQNFEAPNNNQHNMNSNENEHNVVDVTNNNSSNNSPTTPLNYYSSSSLPNLISASSSPDDKCPNKVNNYNNNNNNDNDNYNHCNNSPSSSNNFEMWADFMYEEASDSYWKHIIE | 372 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc151124g00015 | 372 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR | 1 | 322 | - | - | |
Stsc151124g00015 | 372 | Pfam | Myb-like DNA-binding domain | 17 | 64 | IPR001005 | - | |
Stsc151124g00015 | 372 | Pfam | Myb-like DNA-binding domain | 70 | 115 | IPR001005 | - | |
Stsc151124g00015 | 372 | SMART | sant | 16 | 66 | IPR001005 | - | |
Stsc151124g00015 | 372 | SMART | sant | 69 | 117 | IPR001005 | - | |
Stsc151124g00015 | 372 | Gene3D | - | 16 | 69 | - | - | |
Stsc151124g00015 | 372 | Gene3D | - | 72 | 119 | - | - | |
Stsc151124g00015 | 372 | CDD | SANT | 72 | 115 | IPR001005 | - | |
Stsc151124g00015 | 372 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 65 | 119 | IPR017930 | - | |
Stsc151124g00015 | 372 | ProSiteProfiles | Myb-like domain profile. | 65 | 115 | IPR001005 | - | |
Stsc151124g00015 | 372 | MobiDBLite | consensus disorder prediction | 259 | 343 | - | - | |
Stsc151124g00015 | 372 | CDD | SANT | 19 | 64 | IPR001005 | - | |
Stsc151124g00015 | 372 | ProSiteProfiles | Myb-like domain profile. | 12 | 64 | IPR001005 | - | |
Stsc151124g00015 | 372 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Stsc151124g00015 | 372 | FunFam | MYB-related transcription factor | 16 | 69 | - | - | |
Stsc151124g00015 | 372 | FunFam | Transcription factor MYB39 | 72 | 133 | - | - | |
Stsc151124g00015 | 372 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 12 | 64 | IPR017930 | - | |
Stsc151124g00015 | 372 | SUPERFAMILY | Homeodomain-like | 14 | 111 | IPR009057 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc151124g00015 | Stsc-Chr151124 | 65960 | 67658 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc151124g00015 | 1 | 372 | MYB Transcription Factor Family | AT5G16770 | 47.105 | 1.54e-92 | 278 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Stsc151124g00015 | Myb_DNA-binding | 3.5e-15 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc151124g00015 | K09422 | - | gmx:547488 | 336.65 |