Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151122g00015 ATGGAGATGAGCTGCCAAGAAAATGTTGGCGGTAGTGATATTCCTGCATGTTCTACGGTAGGAAATATTTCACATCATGACCAGAGTTTAAATAGCTATGTGCAGCAGCCTGCTTTTGTGAGTGGATGGATGTATGTGAATGAAAAAGGGCAAATGTGTGGTCCATATATTCAGGAGCAACTATATGAGGGTTTAACTACTGGTTTCTTGCCATTTGAGCTTCCTGTCTATCCTATGATTAATGGCACAGTAATGAACCCTGTCCCATTGAATTACTTCAAGCAGTTTCCTGATCATGTCTCTACTGGGTTTGCATATCTGAATCTGGGTTTCTCTGGCTCAAGGGTTCATACAAATTGTCCCTCCTCTTCTATGGATATGGCAATATATGGGCAAAATCAATCTTTTGAAAATGCTGCTTCTTTGGCTGTTAACTCTGGCTCACAGTCAGTTCCGCATTCACATAGCAATTACTGCATTAGTCAACCTAATCACCAATGTTCAAAATCAGAGTTGTTCAACAGTATGATATCTTCTCAGATGTTGCGTGAAGAACGCTGTTGGCTTTATGAGGATGAAAAGGGAATGAAACGGGGTCCACATTCTATTACAGAATTGATTTCCTGGCACCATCATGGATATCTTCAGGATTCATCAGTTATATCTCATTTTCGCAATGAGTACGGCTCCTTTGTGCTAGTTGCTGCTGTAAATGCTCTGAAAGGTTATACATCCGGAACCATTTGTAAATCAGGTTCCATTGACAATGAGGTTGGTGGTACGGTAAACTTAATCTGTGAAATATCTGAGGACATTTCTTCCCAATTGCACATGGGTGTTATGAAAGCTGCCCGCAGAGTTGTGCTTGATGGGGTTATAAGTGATATTATTGCAGACTTTTTTACTGAAAAGAAACACAAGAAGCAGAAGCTTGAATCAACTAACCAGGCTTCTGAGACCTCTGTGGTTGACAGCAAAATGTCCAAGGTTGCTGCGGAGATTAGTATAGATACTACTGTTCCAAGTGAGCATGCATATTCCCGTATTGCAGATGATCGGGCTTGTCTGAAACTTTCTAGTTCATCTTCAACAAATATTAAATCGGTTGGAAGTGTTGAAAACTTTTGGTGGTCATATTCTGTTGCACGTAAAGTACTTGTTGATTACTGCATGCAAGTCATGTGGAATGCTGTGTTTTTTGACCCTATAGCAGAGTACATAGGTTCGTGGAGGAAGAATAAACTTTGGTCTCATCCTAAGCCTCAAATATTTGTTGATGAATGTGGAGAATATGACAGAGAGATTAAATCTGAAGCTTTGCTTCTTGGGACAGGTTGTTCTAAATACCCTACTGATGGCTGTTATCAGTTTGGAGTGCTGACAATGGGAACAGATTCTCATTCTAAGTTATCTTCTAATGTACCCAAAGATCGAAATTCAATGGAAGGTCAAAGAGTGTCGGGCACTTATAGTAACTCCAAAAATTTGACAGGCATTATTGAAAGTGTGGAGAATGAGCTTCACTTCTCTTCAAAGGTGTCATTGGCTGAATACATTCAAAGCTTTGTTGAAAAGGAAGTGAACAAAATAATTCATTCCCCTCATGAAGACAAATTGAATAAGGTTGCTGTTAGTGTCGGTGGTTTCTCGGAACTGCACACTGATGAAACTCCTATGAAGGAAATTCTAAATGACAAGTTAGTAGCTACTGTTAAGGCTAAAGATTCAGTTTGTGAGCCTTCATTAGCAAATCATATGTCTAATGTATTATCAAATGCATTTGAGGAGTTGTGTGGGGGTGTAGATGTAGTTGATGAAGAGGAAATTGGTGACCTTCCACCTGGATTTGAAGAGAACTTGCACGCAATTTTCCCACCACCCAATTTGAAGTTTCGACCTTCAAGGGTAGCTGAATGTAATCCTAAGATTACAGAATATGTTGCAACTGCACTGTGCCGACAGAAGTTGCATAATGAAGGCCTAGAAGAGTGGAAGTCTGCATTTTTTTATTCTACATTGAATCAAGCTATTATGTCTAATAAGAAACGTAGTCATTCTGGTGTTAAGAAAGGAAAAGCAAAGAAAGCAAGGAAGGAAAACTTAAATGATGCTACTTCCGGACAAGGAAAGATGAAAGGAGATGCAAAAAGCTCTTCTGGAGTTCCTTTAGTTAATGGGAAATTAACACTTGTGGCCTTTCTTTATTCAGATGATGTTGTGGATGTCATTAAATCTAATGAAAAAAGGCTTTCTGGATCAACAAATAATAGTGTTGGCATGAAGAAGGCAGTTAAAAGAAATGTTTCAGATGTCCTAAAATCTAATGAAAAGAGGCTTTCAGCATCAACAAATAATAATGTTTCCATGAAGAAGGTGGCTAAAAGCAATGGCAGTGAAGACACCATTAAGGGGAAGACTCCTGGTCATTGCTCCAAACAGAGACCGAATGCTAATAAAATGTCAAAACCAAAGAGGAAACATTCTACAGATGGTTCGCCATCCTCACATCCTGCCAAGGCTTTGAAGCTTTCAAATGATGGTGCAAAGCATGGGCCAAGTAAACAGGCTACTGTTACAAGAAGGAGTTCTGTCAAATCCAAGCCATTGAATTTATGTCCTAGATCCGATGGATGTGCTAGGACTTCCATTGATGGGTGGGAATGGCATAAATGGTCTCGAAGTGCTATTCCTGCACATAGAGCACGTGTCAGGGGCATTTCCTGTGTACAAAACAAGTGCATAGATTCAGATAATATTTTATCGCAGCTATCAAATAATAAGGGTCTTTCTGCAAGAACAAATAGGATGAAATTGCGCAACCTCCTTGCTGCTGCTGAGGGTGCAGATCTTCTGAAAGTGCCTCAATTGAAGGCAAGGAAAAAACGATTACGTTTTCAAAGGAGCAAGATACATGACTGGGGTCTTGTTGCGATGGAGCCAATAGAGGCAGAGGACTTCGTGATTGAATATGTTGGAGAACTAATTCGTGCTCGGATATCTGATATCCGTGAACTTCAGTATGAGAAGATGGGAATTGGAAGCAGTTACCTTTTTAGACTTGATGATGGTTATGTGGTTGATGCTACAAAGAGAGGTGGGATTGCAAGATTTATTAACCATTCTTGTGAGCCCAATTGCTATACAAAGGTCATATCTTTCGAGGGTCAAAAGAAGATTTTCATATATGCAAAACGGCATATTGCTGCTGGTGAAGAGCTTACTTATAATTATAAGTTCCCCTTGGAGGATAAAAAGATTCCCTGCAACTGTGGTTCCAGAAAGTGTCGTGGATCACTTAACTAG 3303 0.3978 MEMSCQENVGGSDIPACSTVGNISHHDQSLNSYVQQPAFVSGWMYVNEKGQMCGPYIQEQLYEGLTTGFLPFELPVYPMINGTVMNPVPLNYFKQFPDHVSTGFAYLNLGFSGSRVHTNCPSSSMDMAIYGQNQSFENAASLAVNSGSQSVPHSHSNYCISQPNHQCSKSELFNSMISSQMLREERCWLYEDEKGMKRGPHSITELISWHHHGYLQDSSVISHFRNEYGSFVLVAAVNALKGYTSGTICKSGSIDNEVGGTVNLICEISEDISSQLHMGVMKAARRVVLDGVISDIIADFFTEKKHKKQKLESTNQASETSVVDSKMSKVAAEISIDTTVPSEHAYSRIADDRACLKLSSSSSTNIKSVGSVENFWWSYSVARKVLVDYCMQVMWNAVFFDPIAEYIGSWRKNKLWSHPKPQIFVDECGEYDREIKSEALLLGTGCSKYPTDGCYQFGVLTMGTDSHSKLSSNVPKDRNSMEGQRVSGTYSNSKNLTGIIESVENELHFSSKVSLAEYIQSFVEKEVNKIIHSPHEDKLNKVAVSVGGFSELHTDETPMKEILNDKLVATVKAKDSVCEPSLANHMSNVLSNAFEELCGGVDVVDEEEIGDLPPGFEENLHAIFPPPNLKFRPSRVAECNPKITEYVATALCRQKLHNEGLEEWKSAFFYSTLNQAIMSNKKRSHSGVKKGKAKKARKENLNDATSGQGKMKGDAKSSSGVPLVNGKLTLVAFLYSDDVVDVIKSNEKRLSGSTNNSVGMKKAVKRNVSDVLKSNEKRLSASTNNNVSMKKVAKSNGSEDTIKGKTPGHCSKQRPNANKMSKPKRKHSTDGSPSSHPAKALKLSNDGAKHGPSKQATVTRRSSVKSKPLNLCPRSDGCARTSIDGWEWHKWSRSAIPAHRARVRGISCVQNKCIDSDNILSQLSNNKGLSARTNRMKLRNLLAAAEGADLLKVPQLKARKKRLRFQRSKIHDWGLVAMEPIEAEDFVIEYVGELIRARISDIRELQYEKMGIGSSYLFRLDDGYVVDATKRGGIARFINHSCEPNCYTKVISFEGQKKIFIYAKRHIAAGEELTYNYKFPLEDKKIPCNCGSRKCRGSLN 1100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151122g00015 1100 MobiDBLite consensus disorder prediction 850 869 - -
Stsc151122g00015 1100 CDD SET_SETD1 949 1096 IPR037841 GO:0042800|GO:0048188
Stsc151122g00015 1100 Gene3D SET domain 890 1099 IPR046341 -
Stsc151122g00015 1100 ProSiteProfiles GYF domain profile. 185 241 IPR003169 GO:0005515
Stsc151122g00015 1100 Pfam SET domain 973 1077 IPR001214 GO:0005515
Stsc151122g00015 1100 MobiDBLite consensus disorder prediction 468 487 - -
Stsc151122g00015 1100 ProSiteProfiles SET domain profile. 961 1078 IPR001214 GO:0005515
Stsc151122g00015 1100 SUPERFAMILY GYF domain 180 236 IPR035445 -
Stsc151122g00015 1100 MobiDBLite consensus disorder prediction 773 869 - -
Stsc151122g00015 1100 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 771 1100 IPR044570 GO:0042800|GO:0051568
Stsc151122g00015 1100 SMART set_7 961 1084 IPR001214 GO:0005515
Stsc151122g00015 1100 MobiDBLite consensus disorder prediction 774 802 - -
Stsc151122g00015 1100 SUPERFAMILY SET domain 956 1097 IPR046341 -
Stsc151122g00015 1100 ProSiteProfiles Post-SET domain profile. 1084 1100 IPR003616 -
Stsc151122g00015 1100 MobiDBLite consensus disorder prediction 681 720 - -
Stsc151122g00015 1100 Gene3D - 174 252 IPR035445 -
Stsc151122g00015 1100 SMART PostSET_3 1084 1100 IPR003616 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151122g00015 Stsc-Chr151122 116390 124590 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151122g00015 960 1100 C2H2 Transcription Factor Family AT2G23740 34.969 2.69e-17 85.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Stsc151122g00015 SET 7.9e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151122g00015 - - ccaj:109804065 1349.34