Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151122g00003 ATGTCTTCACAGGTGCGAAGGTATGTTTACCATGATGTGGTTCGATTGGATGACCTGGAAAAGCTCATTGATTGTTCCAATATTCAGCCTTACACAATAAACAGTGCGAAGGTGATATTCTTAAATGAGAGGCCACAATCAAGGTCATGCAAAGGGAGTGCCAATTCTTGCTTCACTTGTGATAGGATTCTTCAGGACCCTTTCCACTTTTGTTCTCTCTCATGCAAGGTGAATTACATGGTATACGAGGGCGAAAGTTTGTCGAGCATTTTACATCGATTCGATGAATCTGACTTCGCAATTTCGCAGTTCGAGGGTCTTAGAGTTGATGGCTCAGAGGTCATTGACGAAGATACCCATTATGCCCCTACTTCCTCCTACTCCAACACCACCGATGCCACCAGCAATTCCGTCATTTCATGTGAACCCAACAACACTTCTTCTAAGAAGAACAAGACCAGCAGGTTCCTCCCTGGAATTGTTCTCTCTCTTGGCAGTAGAAGAAAGGGTGCTCCTCATAGGGCACCTCTCTCCTAA 537 0.4488 MSSQVRRYVYHDVVRLDDLEKLIDCSNIQPYTINSAKVIFLNERPQSRSCKGSANSCFTCDRILQDPFHFCSLSCKVNYMVYEGESLSSILHRFDESDFAISQFEGLRVDGSEVIDEDTHYAPTSSYSNTTDATSNSVISCEPNNTSSKKNKTSRFLPGIVLSLGSRRKGAPHRAPLS 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151122g00003 178 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 4 177 - -
Stsc151122g00003 178 Pfam PLATZ transcription factor 6 77 IPR006734 -
Stsc151122g00003 178 MobiDBLite consensus disorder prediction 120 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151122g00003 Stsc-Chr151122 25230 30772 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Stsc151122g00003 PLATZ 1.5e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151122g00003 - - gmx:100806234 313.538