Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151120g00014 ATGACTACTCCAATGTCAAGCTCCAAAGTGTACTTCATTGCAAGTAGTTCTGGATTTGTAAAGATAGCCCCATTGGAAAGCATGCCTGATCCTTCAACAAATTTGCAGGGGGATGATGATGATGAGATTCAACCACTTTCCGGATGCCCATTCTATCATGTGATTCTTTCAAAGTCACATCTTAATCCTCAGTATAAAATGCCGCTTTCGAACACCTTGCCACTTCCGGCTGCCGAAGTCCTGGCTATTCTCAACTGTGGAAGCAAGAGCTGGCACATGCGGTATTGCCGACTAGGCAAAAGTTCCAACAGGTTCTTTAACCATAGAGGCTGGAAAAAATTTGCTGTTGAAAATGGTTTGAAGGATGGGGACGCTTGTGTGTTTGAACTCAAGGAGAGCAGTGAAGAGAAACTTGTCTTCCAAGTTCAAATTCTCAGAGGTGACATCCCTGAAACCCTTCTTGGAAGGAAAGAGAAAGAGAAGGAAAAGATAAAGAAAAAGACAATGGCTAAGGATGCAGAAAAGCCAAGAGGTAAAAGTGCAGAAAACAACCAAACTGGGGAGAGTGCAGAAATGGCAATTCTCATTGACTAG 594 0.431 MTTPMSSSKVYFIASSSGFVKIAPLESMPDPSTNLQGDDDDEIQPLSGCPFYHVILSKSHLNPQYKMPLSNTLPLPAAEVLAILNCGSKSWHMRYCRLGKSSNRFFNHRGWKKFAVENGLKDGDACVFELKESSEEKLVFQVQILRGDIPETLLGRKEKEKEKIKKKTMAKDAEKPRGKSAENNQTGESAEMAILID 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151120g00014 197 ProSiteProfiles B3 DNA-binding domain profile. 81 148 IPR003340 GO:0003677
Stsc151120g00014 197 Gene3D - 39 148 IPR015300 -
Stsc151120g00014 197 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 47 151 IPR044837 -
Stsc151120g00014 197 MobiDBLite consensus disorder prediction 157 181 - -
Stsc151120g00014 197 MobiDBLite consensus disorder prediction 157 197 - -
Stsc151120g00014 197 CDD B3_DNA 50 146 IPR003340 GO:0003677
Stsc151120g00014 197 Pfam B3 DNA binding domain 81 142 IPR003340 GO:0003677
Stsc151120g00014 197 SMART B3_2 52 148 IPR003340 GO:0003677
Stsc151120g00014 197 SUPERFAMILY DNA-binding pseudobarrel domain 48 148 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151120g00014 Stsc-Chr151120 97146 99169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151120g00014 55 148 REM Transcription Factor Family AT4G33280 32.979 2.09e-08 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Stsc151120g00014 B3 4.9e-14 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151120g00014 - - adu:107484003 241.506