Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151120g00010 ATGATGAAGCTGCGAATGGGAACGGGAACGCGAATAATCCTCATTTCCGCAGCGTTGTTCTTGTTATGCCTCCAATTTTGTTCTTCTTCAGTTCCTAATGACGTATTCTATGGAATCGCTCCTCAAGATGAGAAATATTACAAGTCTTCGGATGTGATAAGATGCAAAGATGGATCGGGAAAATTCACCAAAGAACAGCTCAATGACGATTTCTGCGACTGCCCCGATGGAACCGATGAGCCTGGTACATCAGCATGTCCCGGTGGAAAATTTTATTGCCAGAATGCAGGGCATGTACCTACTACTCTGTTTTCGTCTAGGGTGAACGATGGAATTTGTGATTGCTGTGATGGAAGTGATGAATATGATGGCAAAGTAACATGCCCAAATACCTGCTGGGAGGCTGGGAAAGTTGCTCGGGATAAGCTGAAAAAGAAGATTGCCACATATCAAGATGGTGTCAAGATCCGGAAGGAAGAAATTGAAAAAGCGAAATCAGCTCTGGCTAAGGACCAGGCTGAGCTTTCAAAATTGAAAAAAGAAGAGACCACACTTAAAGACATTGTGCAACAGCTAAGAGAGCATAAAGAAGAAATAGAGAAGGAAGAGGAGAAGGAGCGCTTATGGAAGGAAAAGGAAGAGAAAGAGAAAAAGGAGGCCGAGGAGAAAGCTAATGCAGAAAAATCTGCAGCTACTGGAGAAGAAGCAGGGCATACAAATGAAGCAGGAAAGCATTCAGATGCCGAAGACCATGCTGTGCATGAAGCAAAGGATGAGCCAGATGATGTAGATGATCGTTATGATGGAGCCACAGATAGCCCTGGTGACGATGGATCTCTGCTTAATGAAGTGGAGGAGAGTGTGAAGAGTGCTGAGGGTGAAGATGCTTCTAAATCAGAAACTGATTTGAAGGTTGAAAAGAAAGAGTCTTCTGAAGAAATAATCAATACGGGGAATGATGCATCTGAAAATACTGAGGGATTATCAAAGGAAGAATTGGGTCAGCTTGTCGCTTCTCGCTGGACAGGACAAAAGGGTGGTAAGCAAAGTGGTGAAGCTGAAACTGCAAAGAAAAATGAAGAAGAGGAAGATCTCACAACGGAGTCCAATAACGAGGAGTTTGAAAACTATGCTTCTGAAACTGACGATGACAGGAGCCAATATGATGGAGAAGATGAAAACGAAGATGACTTTAGAGAGGATGAGCATGATGATGACGGATCCTCTTACAAATCTGATGCAGATTTTGAAGGTGAACCAGACTTGTCAGATGGTCCTTCTTGGTTAACGAAAATACAGAGAACTGTACGGAAACTTTTTAAGGCTGTTAATTTCTTTGAGACTCCATTGAATCAGACAGATGCTGCTCGTGTACGAAAGGAATACAATGAGTTGAGTTCCAAGTTGTCAAAATTACAGTCAACAGTATCAAGTCTGTCAAAAAAGTTAAAACATGATTTTGGTCCAGAGAGTGAGTTCTATTCATTCTATGATCGATGCTTTGAGAGCAAACAGAACAAGTACACTTACAAAGTCTGCCCTTATGACCAGTCTTCTCAGGAGGAGGGCTATTCAACTACCCGTTTGGGCCGCTGGGACAAATTTGAGGACTCCTATAAAGTAATGGCATTTTCTAATGGTGATAAATGCTGGAATGGTCCTGATAGAAGCATGAAGGTTAGGATGAGATGCGGGCTGAAAAATGAGATTACAGATGTGGATGAACCAAGCCGATGCGAATATGTAGCTTTGTTATCTACCCCAGCTCTTTGTAAAGAAGAAAAGCTGAAGGAATTACAACACAAATTAGACGAATTGAATTCGCAGCAACCTGAAAAACACGACGAGTTGTGA 1854 0.4223 MMKLRMGTGTRIILISAALFLLCLQFCSSSVPNDVFYGIAPQDEKYYKSSDVIRCKDGSGKFTKEQLNDDFCDCPDGTDEPGTSACPGGKFYCQNAGHVPTTLFSSRVNDGICDCCDGSDEYDGKVTCPNTCWEAGKVARDKLKKKIATYQDGVKIRKEEIEKAKSALAKDQAELSKLKKEETTLKDIVQQLREHKEEIEKEEEKERLWKEKEEKEKKEAEEKANAEKSAATGEEAGHTNEAGKHSDAEDHAVHEAKDEPDDVDDRYDGATDSPGDDGSLLNEVEESVKSAEGEDASKSETDLKVEKKESSEEIINTGNDASENTEGLSKEELGQLVASRWTGQKGGKQSGEAETAKKNEEEEDLTTESNNEEFENYASETDDDRSQYDGEDENEDDFREDEHDDDGSSYKSDADFEGEPDLSDGPSWLTKIQRTVRKLFKAVNFFETPLNQTDAARVRKEYNELSSKLSKLQSTVSSLSKKLKHDFGPESEFYSFYDRCFESKQNKYTYKVCPYDQSSQEEGYSTTRLGRWDKFEDSYKVMAFSNGDKCWNGPDRSMKVRMRCGLKNEITDVDEPSRCEYVALLSTPALCKEEKLKELQHKLDELNSQQPEKHDEL 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151120g00010 617 Gene3D - 493 591 IPR009011 -
Stsc151120g00010 617 MobiDBLite consensus disorder prediction 197 427 - -
Stsc151120g00010 617 Pfam Glucosidase II beta subunit-like 33 180 IPR028146 -
Stsc151120g00010 617 Pfam Glucosidase II beta subunit-like protein 459 609 IPR036607 -
Stsc151120g00010 617 MobiDBLite consensus disorder prediction 287 314 - -
Stsc151120g00010 617 MobiDBLite consensus disorder prediction 238 272 - -
Stsc151120g00010 617 SUPERFAMILY Mannose 6-phosphate receptor domain 500 591 IPR009011 -
Stsc151120g00010 617 MobiDBLite consensus disorder prediction 404 418 - -
Stsc151120g00010 617 ProSiteProfiles MRH domain profile. 463 593 IPR044865 -
Stsc151120g00010 617 Coils Coil 589 616 - -
Stsc151120g00010 617 MobiDBLite consensus disorder prediction 365 403 - -
Stsc151120g00010 617 Coils Coil 455 482 - -
Stsc151120g00010 617 MobiDBLite consensus disorder prediction 197 229 - -
Stsc151120g00010 617 Coils Coil 161 230 - -
Stsc151120g00010 617 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 13 617 IPR039794 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151120g00010 Stsc-Chr151120 76963 84095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151120g00010 28 617 Calmodulin-binding Proteins AT5G56360 54.662 0.0 584
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151120g00010 K08288 - gmx:100807083 799.66