Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151118g00014 ATGGAGGGGAAGGAGCAAGATGTGTCGTTGGGAGCTAACAAGTTCCCAGAGAGGCAGCCGATCGGGACGGCGGCACAAAGCCAAGACGGAAAGGACTACACGGAGCCACCACCAGCTCCGCTATTCGAGCCCTCAGAGCTGACCTCATGGTCTTTCTACAGGGCCGGAATAGCGGAGTTTGTGGCCACTTTCCTCTTTCTCTATATCACAATCTTGACGGTTATGGGAGTGAATAGGTCTTCTTCCAAGTGTGCCACAGTTGGTATTCAAGGAATTGCTTGGTCCTTTGGTGGCATGATCTTTGCCCTTGTTTACTGCACCGCTGGCATTTCTGGTGGTCACATTAACCCGGCAGTGACATTCGGTTTGTTCTTGGCAAGGAAGTTGTCTTTGACAAGGGCATTGTTCTACATCGTCATGCAGTGCCTTGGAGCAATTTGCGGTGCTGGAGTCGTTAAGGGCTTTGAGGGCAAAACCTTCTTCGGTAGCCACAACGGTGGTGCCAACTTCGTCGCTCCTGGTTACACCAAAGGCGACGGCCTTGGCGCCGAGATTGTTGGCACCTTCATTCTTGTCTACACCGTCTTCTCGGCCACCGATGCCAAACGCAACGCCAGAGACTCACACGTCCCTTGGATTTTCTGGGTGGGTCCTTTTGTTGGAGCAGCTCTTGCGGCTCTCTACCACCAAGTTGTGATCAGGGCCATTCCTTTCAAATCAAGCTAA 726 0.5248 MEGKEQDVSLGANKFPERQPIGTAAQSQDGKDYTEPPPAPLFEPSELTSWSFYRAGIAEFVATFLFLYITILTVMGVNRSSSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIVMQCLGAICGAGVVKGFEGKTFFGSHNGGANFVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPWIFWVGPFVGAALAALYHQVVIRAIPFKSS 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151118g00014 241 MobiDBLite consensus disorder prediction 1 37 - -
Stsc151118g00014 241 Gene3D Glycerol uptake facilitator protein. 39 212 IPR023271 -
Stsc151118g00014 241 PRINTS Major intrinsic protein family signature 133 152 IPR000425 GO:0015267|GO:0016020|GO:0055085
Stsc151118g00014 241 PRINTS Major intrinsic protein family signature 54 73 IPR000425 GO:0015267|GO:0016020|GO:0055085
Stsc151118g00014 241 PRINTS Major intrinsic protein family signature 212 232 IPR000425 GO:0015267|GO:0016020|GO:0055085
Stsc151118g00014 241 PRINTS Major intrinsic protein family signature 96 120 IPR000425 GO:0015267|GO:0016020|GO:0055085
Stsc151118g00014 241 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 13 211 IPR034294 -
Stsc151118g00014 241 SUPERFAMILY Aquaporin-like 46 234 IPR023271 -
Stsc151118g00014 241 Pfam Major intrinsic protein 46 210 IPR000425 GO:0015267|GO:0016020|GO:0055085
Stsc151118g00014 241 ProSitePatterns MIP family signature. 114 122 IPR022357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151118g00014 Stsc-Chr151118 55345 57495 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151118g00014 1 241 Major Intrinsic Protein MIP AT4G23400 70.139 1.90e-130 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151118g00014 K09872 - gmx:100791447 445.277