Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151115g00007 ATGGATTTGACAGCGGAGAAGAAGGAATTTGACAGCAACAACAACACTAACTCTGACATTCCTCACCCAACCCTTCATTCTTCTTCCGAACCCGACGAGCGCTATTCTCGTGACCTTAAAGCTGCTCTTCACCCTCTAAAGCACAAATTTGTATTTTGGTACACACGGCGAACACCGGGAGTTCGAAATCAAACATCTTATGAGGATAACATCAAGAAAATTGTTGATTTCAGTACGGTTGAAGGATTTTGGGTTTGCTATTGCCATCTTGCTCGACCTTCCTCTTTGCCTAGTCCAACAGATTTGCATCTTTTTAAGGAAGGAATTCGACCCCTATGGGAGGACTCTGCTAACTGCAATGGTGGTAAATGGATCATACGGTTCAAAAAGGCTGTCTCAGGTCGTTTTTGGGAGGACCTGGTTCTTGCCTTAATAGGTGACCAATTAGATTATGGAGATAACATATGTGGTGTGGTACTTAGCATTCGTTTTAACGAGGATATACTTAGCATCTGGAATCGCAATGCTTCTGACAATCAGGCTGTAATGGCTCTCAGAGATTCCATTAAGCGTCATTTGAAGCTTCCTCACGGCTATATTATGGAGTACAAACCCCATGATGCCTCCCTAAAGGACAATTCATCTTACAGGAACACTTGGTTAAGAGGCTAG 672 0.4315 MDLTAEKKEFDSNNNTNSDIPHPTLHSSSEPDERYSRDLKAALHPLKHKFVFWYTRRTPGVRNQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSSLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKAVSGRFWEDLVLALIGDQLDYGDNICGVVLSIRFNEDILSIWNRNASDNQAVMALRDSIKRHLKLPHGYIMEYKPHDASLKDNSSYRNTWLRG 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151115g00007 223 Gene3D RNA Cap, Translation Initiation Factor Eif4e 17 216 IPR023398 -
Stsc151115g00007 223 FunFam Eukaryotic translation initiation factor NCBP 16 216 - -
Stsc151115g00007 223 MobiDBLite consensus disorder prediction 1 32 - -
Stsc151115g00007 223 Pfam Eukaryotic initiation factor 4E 45 203 IPR001040 GO:0003723|GO:0003743|GO:0006413
Stsc151115g00007 223 ProSitePatterns Eukaryotic initiation factor 4E signature. 101 124 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Stsc151115g00007 223 SUPERFAMILY eIF4e-like 27 219 IPR023398 -
Stsc151115g00007 223 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 21 213 IPR001040 GO:0003723|GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151115g00007 Stsc-Chr151115 41689 44260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151115g00007 9 223 Eukaryotic Initiation Factors Gene Family AT5G18110 76.279 1.88e-121 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151115g00007 K03259 - rvl:131318820 404.06