Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151114g00022 ATGGATGAGGCTAGACCTCGGAATAATGAAACTGCTGCTGCATCATCATCATCATCATCGCCATCATCGGCTTCAGCTTCACGGTTGCCGGTGTCTTCTGGATGGCGTCCGAGTCGGGTTGTGTTTGGTCCTTATGTGCCACCACAAGGTGAAGAAGCCACAGCTCAAAGGCCACAGAGATTGAGAGTGGCAGTGGCAGTGAGGAAGCCTTTGGTGGCAAGATTGACCAAGGAAATAGTTGAAACATATCAAATTTGCAATCCAAAGTTTAAATATTCTGAAGATCTAAATCCAAAAAGATTTTTGACCACTCCATCAGTTGGAGTGCTTAATGATGGCTATGATAATGTAAACTCAGATCTTATTCTGACAGTGAATCTTGTTTTGGTCCATGCAGAGAAAAATAAAAGATATATTGTCAAAGATCTTCTTGGCCATGGGACATTTGGTCAAGTGGCGAAATGTTGGGATTCAGATACCAACAGTTTTGTCGCTGTGAAGATCATTAAAAATCAACCTGCATACTATCAACAGGCACTGGTTGAAGTAACTATATTGACAACGTTAAATAAGAAGTATGACCCTGAGGATAAGCATCACATTGTTCGTATATATGATTATTTTGTGTATCAAAGACATTTGTGCATATGTTTTGAACTGCTGGACACAAACTTGTATGAGCTTATCAAGATGAATCATTTTAGAGGATTATCGCTTAGCATTGTTCAGCTGTTCTCTAAGCAGATTTTATGTGGACTGGCACTATTAAAGGATGCTGGCATTATTCATTGTGATCTGAAGCCAGAAAACATTCTTTTATGTACGAGCACTGTGAAGCCGGCAGAAATAAAAATTATTGACTTTGGATCAGCATGCATGGAAAACCGCACTGTTTACTCCTATATTCAGAGTCGATATTATAGATCCCCTGAAGTTCTTCTTGGATATCAATACACAACAGCTATTGATATGTGGTCCTTTGGGTGCATAGTAGCTGAATTGTTTCTTGGATTACCATTATTCCCCGGGGCTTCTGAATTTGATCTTTTGAGGCGAATGATTGAAATACTTGGAGGACAGCCACCTGATTATCTGTTGCGGGAGGCCAAAAACACAAGTAAATTCTTTAAGTGTATTGGAAGTCTCCAGAGCATAGAGCTCAGTGAGGGTTCAAAAAATGGAAGAAGTGTTTATCAAGCATTGACGGAGGAAGAGTATGAAGCTAGAGAAATGAAGAAGCCAAGTGTAGGAAAGGAGTATTTTAATCATATGAATCTCGAAGCAATTGTCACAAACTATCCCTATAGGAAAAACCTGCCCAAGGAAGATATTATCAGAGAAAGTCAAATAAGATTGGCTCTTATTGATTTTTTGAGAGGACTAGTTGAATTTGATCCTGCGAAACGATGGTCACCTTTCCAGGCCTCAAAACACCCTTTTGTAACTGGAGAGCCTTTTACACAACCTTACCAGCCTCCCCCCGAGACACCTCGCGTGCCGGTGGTTCAAACTGTCAAGGTGGATAATAATCATCCAGGTGGAGGGCACTGGTTTGCTGCTGGCCTATCGCCTAATGTTCCAGGCAAAAGCAGACCTTCCCTCTATAGTGCACATTTTCAGATGATGCAGTATCCACCTTCTAATAGTTACGGCAGTGTAGGAAGCCATGGGAGCTATAATGAGAGCATTGGGCTTGGTAGCAGCTATGGAAGTTACGGAGACAACAGTAACATGTTTCCTTACTATTCACCTGTTGGTCCATCTGGTATGAACATGCATAACCAAGGTGGTATGGCAATGCTTGGAAATAGTCCTGATGCTCGGAGGAGAGTTAAGTATCAACCCGGAAGTGGGCTGGGTATAAGCCCTTCAACAGGAAATTTTACCCCGCTGCCCCTTGGTGCCAGCCCCTCTCAATTCACTCCGCCGAGTTCCTATGGTCAAGTTGGTTCTCCTGGACACTATGGACCTACATCTCCTGCCAGGGGAACCACTCATGGATCACCTTTAGGGAAGACACCTGCAGTTAGTCAATTTAATCGAAGGAAAAACTGGGGATATTCCGGAAGTCCTCAAACTCAAGAAACAGGATTTTCTTCACATTGGCAAGGTCAAGGTCCTGATAACTCGAACCTTCCGGAGGGAACATCCCAAGCCCTTGGCAGCACACCTTCATATGTGCAGTCAAATATGAACCCTGGACATTGGAAGCAGCGAGGAAGTGGAGGGCTATCTTCGAATTTGGCAATGCAATCAACGGATTTGGCTCATGAGAATGCAGATTCAGGCTTGTCATTGCCTGATCCTGGAGATTGGGACCCTAATTATAGCGATGAACTACTTCTGCAAGAGGATGGTTCAGATGAAGGTTCCTTGACAAATGAGTTTTCCAGAAGTATGAATCTTGGTTCCACTGAACCGTGGGTTGGATCGGGAAGGCTGAATCACGGAACTAGTACAAGCTCTCCAATGATCATTCAGAGACTACCCGCATCAGGTCAAGCATTTTCCGGTGAGATGGGTAGCTCGCCAATGCATCATGATCTCCAAGCAGGATTTGTACCCTCGATGTCAAAGCCTTTTCATTATATGCCTCATGTTTTACAAAATTCTCCAAGCCGGTTTGGTCACCAACCTGTTCAAAGGTTTCCGCATGGTAGACCTCCCCAGAGTGGCGACTGGAATCAACTCAAGGTTGCACCTCCTCCTCCTAGTTTCGGTAGTGTGGGCCAACGCTCTCCTAGGAATACATCATTCTCCAACATGACATGGGGGCGAAGAATGAACCCTCCGGTTTCAAGCATGCCGCCAACTTCTCGTGCAAGAAAAGATTATGCAAGGATTGACTAA 2850 0.4386 MDEARPRNNETAAASSSSSSPSSASASRLPVSSGWRPSRVVFGPYVPPQGEEATAQRPQRLRVAVAVRKPLVARLTKEIVETYQICNPKFKYSEDLNPKRFLTTPSVGVLNDGYDNVNSDLILTVNLVLVHAEKNKRYIVKDLLGHGTFGQVAKCWDSDTNSFVAVKIIKNQPAYYQQALVEVTILTTLNKKYDPEDKHHIVRIYDYFVYQRHLCICFELLDTNLYELIKMNHFRGLSLSIVQLFSKQILCGLALLKDAGIIHCDLKPENILLCTSTVKPAEIKIIDFGSACMENRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIEILGGQPPDYLLREAKNTSKFFKCIGSLQSIELSEGSKNGRSVYQALTEEEYEAREMKKPSVGKEYFNHMNLEAIVTNYPYRKNLPKEDIIRESQIRLALIDFLRGLVEFDPAKRWSPFQASKHPFVTGEPFTQPYQPPPETPRVPVVQTVKVDNNHPGGGHWFAAGLSPNVPGKSRPSLYSAHFQMMQYPPSNSYGSVGSHGSYNESIGLGSSYGSYGDNSNMFPYYSPVGPSGMNMHNQGGMAMLGNSPDARRRVKYQPGSGLGISPSTGNFTPLPLGASPSQFTPPSSYGQVGSPGHYGPTSPARGTTHGSPLGKTPAVSQFNRRKNWGYSGSPQTQETGFSSHWQGQGPDNSNLPEGTSQALGSTPSYVQSNMNPGHWKQRGSGGLSSNLAMQSTDLAHENADSGLSLPDPGDWDPNYSDELLLQEDGSDEGSLTNEFSRSMNLGSTEPWVGSGRLNHGTSTSSPMIIQRLPASGQAFSGEMGSSPMHHDLQAGFVPSMSKPFHYMPHVLQNSPSRFGHQPVQRFPHGRPPQSGDWNQLKVAPPPPSFGSVGQRSPRNTSFSNMTWGRRMNPPVSSMPPTSRARKDYARID 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151114g00022 949 MobiDBLite consensus disorder prediction 9 32 - -
Stsc151114g00022 949 Pfam Protein kinase domain 139 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151114g00022 949 SMART serkin_6 138 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151114g00022 949 FunFam Dual specificity tyrosine-phosphorylation-regulated kinase 1A 101 217 - -
Stsc151114g00022 949 Coils Coil 938 949 - -
Stsc151114g00022 949 PANTHER DUAL SPECIFICITY PROTEIN KINASE 16 484 - -
Stsc151114g00022 949 Gene3D Phosphorylase Kinase; domain 1 103 218 - -
Stsc151114g00022 949 MobiDBLite consensus disorder prediction 909 936 - -
Stsc151114g00022 949 Gene3D Transferase(Phosphotransferase) domain 1 219 482 - -
Stsc151114g00022 949 CDD PKc_YAK1 138 481 - -
Stsc151114g00022 949 MobiDBLite consensus disorder prediction 1 37 - -
Stsc151114g00022 949 MobiDBLite consensus disorder prediction 614 747 - -
Stsc151114g00022 949 ProSiteProfiles Protein kinase domain profile. 138 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151114g00022 949 MobiDBLite consensus disorder prediction 661 747 - -
Stsc151114g00022 949 ProSitePatterns Serine/Threonine protein kinases active-site signature. 261 273 IPR008271 GO:0004672|GO:0006468
Stsc151114g00022 949 MobiDBLite consensus disorder prediction 880 949 - -
Stsc151114g00022 949 ProSitePatterns Protein kinases ATP-binding region signature. 144 167 IPR017441 GO:0005524
Stsc151114g00022 949 SUPERFAMILY Protein kinase-like (PK-like) 133 505 IPR011009 -
Stsc151114g00022 949 MobiDBLite consensus disorder prediction 618 652 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151114g00022 Stsc-Chr151114 115310 123539 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151114g00022 137 367 MAP Kinase Gene Family AT3G18040 33.740 3.02e-31 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-YAK Stsc151114g00022 Pkinase 1.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151114g00022 K18670 - gmx:100792777 1577.76