Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151114g00021 ATGAATCATTTTAGAGGATTATCGCTTAGCATTGTTCAGCTGTTCTCTAAGCAGATTTTATGTGGACTGGCACTATTAAAGGATGCTGGCATTATTCATTGTGATCTGAAGCCAGAAAACATTCTTTTATGTACGAGCACTGTGAAGCCGGCAGAAATAAAAATTATTGACTTTGGATCAGCATGCATGGAAAACCGCACTGTTTACTCCTATATTCAGAGTCGATATTATAGATCCCCTGAAGTTCTTCTTGGATATCAATACACAACAGCTATTGATATGTGGTCCTTTGGGTGCATAGTAGCTGAATTGTTTCTTGGATTACCATTATTCCCCGGGGCTTCTGAATTTGATCTTTTGAGGCGAATGATTGAAATACTTGGAGGACAGCCACCTGATTATCTGTTGCGGGAGGCCAAAAACACAAGTAAATTCTTTAAGTGTATTGGAAGTCTCCAGAGCATAGAGCTCAGTGAGGGTTCAAAAAATGGAAGAAGTGTTTATCAAGCATTGACGGAGGAAGAGTATGAAGCTAGAGAAATGAAGAAGCCAAGTGTAGGAAAGGAGTATTTTAATCATATGAATCTCGAAGCAATTGTCACAAACTATCCCTATAGGAAAAACCTGCCCAAGGAAGATATTATCAGAGAAAGTCAAATAAGATTGGCTCTTATTGATTTTTTGAGAGGACTAGTTGAATTTGATCCTGCGAAACGATGGTCACCTTTCCAGGCCTCAAAACACCCTTTTGTAACTGGAGAGCCTTTTACACAACCTTACCAGCCTCCCCCCGAGACACCTCGCGTGCCGGTGGTTCAAACTGTCAAGGTGGATAATAATCATCCAGGTGGAGGGCACTGGTTTGCTGCTGGCCTATCGCCTAATGTTCCAGGCAAAAGCAGACCTTCCCTCTATAGTGCACATTTTCAGATGATGCAGTATCCACCTTCTAATAGTTACGGCAGTGTAGGAAGCCATGGGAGCTATAATGAGAGCATTGGGCTTGGTAGCAGCTATGGAAGTTACGGAGACAACAGTAACATGTTTCCTTACTATTCACCTGTTGGTCCATCTGGTATGAACATGCATAACCAAGGTGGTATGGCAATGCTTGGAAATAGTCCTGATGCTCGGAGGAGAGTTAAGTATCAACCCGGAAGTGGGCTGGGTATAAGCCCTTCAACAGGAAATTTTACCCCGCTGCCCCTTGGTGCCAGCCCCTCTCAATTCACTCCGCCGAGTTCCTATGGTCAAGTTGGTTCTCCTGGACACTATGGACCTACATCTCCTGCCAGGGGAACCACTCATGGATCACCTTTAGGGAAGACACCTGCAGTTAGTCAATTTAATCGAAGGAAAAACTGGGGATATTCCGGAAGTCCTCAAACTCAAGAAACAGGATTTTCTTCACATTGGCAAGGTCAAGGTCCTGATAACTCGAACCTTCCGGAGGGAACATCCCAAGCCCTTGGCAGCACACCTTCATATGTGCAGTCAAATATGAACCCTGGACATTGGAAGCAGCGAGGAAGTGGAGGGCTATCTTCGAATTTGGCAATGCAATCAACGGATTTGGCTCATGAGAATGCAGATTCAGGCTTGTCATTGCCTGATCCTGGAGATTGGGACCCTAATTATAGCGATGAACTACTTCTGCAAGAGGATGGTTCAGATGAAGGTTCCTTGACAAATGAGTTTTCCAGAAGTATGAATCTTGGTTCCACTGAACCGTGGGTTGGATCGGGAAGGCTGAATCACGGAACTAGTACAAGCTCTCCAATGATCATTCAGAGGTGA 1797 0.443 MNHFRGLSLSIVQLFSKQILCGLALLKDAGIIHCDLKPENILLCTSTVKPAEIKIIDFGSACMENRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIEILGGQPPDYLLREAKNTSKFFKCIGSLQSIELSEGSKNGRSVYQALTEEEYEAREMKKPSVGKEYFNHMNLEAIVTNYPYRKNLPKEDIIRESQIRLALIDFLRGLVEFDPAKRWSPFQASKHPFVTGEPFTQPYQPPPETPRVPVVQTVKVDNNHPGGGHWFAAGLSPNVPGKSRPSLYSAHFQMMQYPPSNSYGSVGSHGSYNESIGLGSSYGSYGDNSNMFPYYSPVGPSGMNMHNQGGMAMLGNSPDARRRVKYQPGSGLGISPSTGNFTPLPLGASPSQFTPPSSYGQVGSPGHYGPTSPARGTTHGSPLGKTPAVSQFNRRKNWGYSGSPQTQETGFSSHWQGQGPDNSNLPEGTSQALGSTPSYVQSNMNPGHWKQRGSGGLSSNLAMQSTDLAHENADSGLSLPDPGDWDPNYSDELLLQEDGSDEGSLTNEFSRSMNLGSTEPWVGSGRLNHGTSTSSPMIIQR 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151114g00021 598 SMART serkin_6 1 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151114g00021 598 MobiDBLite consensus disorder prediction 573 598 - -
Stsc151114g00021 598 SUPERFAMILY Protein kinase-like (PK-like) 4 275 IPR011009 -
Stsc151114g00021 598 MobiDBLite consensus disorder prediction 431 517 - -
Stsc151114g00021 598 MobiDBLite consensus disorder prediction 384 517 - -
Stsc151114g00021 598 MobiDBLite consensus disorder prediction 388 422 - -
Stsc151114g00021 598 PANTHER DUAL SPECIFICITY PROTEIN KINASE 1 254 - -
Stsc151114g00021 598 Gene3D Transferase(Phosphotransferase) domain 1 1 252 - -
Stsc151114g00021 598 ProSitePatterns Serine/Threonine protein kinases active-site signature. 31 43 IPR008271 GO:0004672|GO:0006468
Stsc151114g00021 598 ProSiteProfiles Protein kinase domain profile. 1 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151114g00021 598 Pfam Protein kinase domain 11 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151114g00021 Stsc-Chr151114 115245 120614 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151114g00021 15 283 MAP Kinase Gene Family AT4G36450 29.304 3.41e-22 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-YAK Stsc151114g00021 Pkinase 6.9e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151114g00021 K18670 - gmx:100792777 1053.89