Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151114g00013 ATGCTATCCTCATCTTTCTCTTCACCTCTCACCGCCAATCTCTCTTCTTCGCCGCGCCACGTCAGATCCCGTCCAACAATCTCCGCCACTTCTCCGACACCGGACCATCAACAATCATCGAGTTTTTCTCTCCGCGAAACTGCGTCGTTTTACGAGATCCTCGGAATCCCCGCAGCCGCGACGATCCTCGAGATCAAGGCTGCGTACCGCCGACTCGCCAGGATCTGCCACCCCGACGCCGCTGCAGTGACCGGCGAACGGAACAGAACGTCGTCGGCGGACGAGTTCATGAAGCTCCATGCTGCTTATTCCACGTTATCGGATCCTGAGAAGCGCGCCAGCTACGATAGGAGCTTGCTTCAGCGGCGGCAGGTTCCACTGACGGCGGCGACGCCGGAGTCAAGGTTTTCCGGTTACGGTGGGCGGAGATGGGAAACGGATCAGTGCTGGTAG 453 0.5894 MLSSSFSSPLTANLSSSPRHVRSRPTISATSPTPDHQQSSSFSLRETASFYEILGIPAAATILEIKAAYRRLARICHPDAAAVTGERNRTSSADEFMKLHAAYSTLSDPEKRASYDRSLLQRRQVPLTAATPESRFSGYGGRRWETDQCW 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151114g00013 150 ProSiteProfiles dnaJ domain profile. 49 119 IPR001623 -
Stsc151114g00013 150 CDD DnaJ 50 108 IPR001623 -
Stsc151114g00013 150 ProSitePatterns Nt-dnaJ domain signature. 96 115 IPR018253 -
Stsc151114g00013 150 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 11 149 - -
Stsc151114g00013 150 SUPERFAMILY Chaperone J-domain 18 115 IPR036869 -
Stsc151114g00013 150 PRINTS DnaJ domain signature 69 84 IPR001623 -
Stsc151114g00013 150 PRINTS DnaJ domain signature 51 69 IPR001623 -
Stsc151114g00013 150 PRINTS DnaJ domain signature 91 111 IPR001623 -
Stsc151114g00013 150 Gene3D DnaJ domain 34 132 IPR036869 -
Stsc151114g00013 150 MobiDBLite consensus disorder prediction 1 41 - -
Stsc151114g00013 150 SMART dnaj_3 48 111 IPR001623 -
Stsc151114g00013 150 Pfam DnaJ domain 50 116 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151114g00013 Stsc-Chr151114 76391 76843 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151114g00013 40 116 C2H2 Transcription Factor Family AT1G74250 38.961 1.96e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151114g00013 - - adu:107478883 219.935