Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151112g00009 ATGATGGCGCAAATTCCATCAGCACCACTCATCAGAGTCCATGAAGTGTACAAGGTGAGGCCGTCACAAACCACCATCGAAACCACCACCCTTCCCCTCACCTACTTCGACTTAATATGGCCAATGCTTCCACTAGTTCAGTGTATCTTGTTCTACGAATTCCCAGCAAACCAAACCATTTATTTCTTTGACTCTGTTGTTCCCAATCTCAAACGCTCCCTTGAGCTCACCCTCCAACACTTCTTCCCCCTCGCTGGTAACATCAGTCGCCCACAACATTCTCTCATTCCCACCATCACCTACGTCCCCCAGCAAGACTCTGTTTCTCTCACTATATGCGAATCAAACGACGACTTTGACCAAATTAGCTCCGATTTCTGTGAGATTTCTAAACGGCACCGTTTGCTACCTAGCTTGAGTGTTTCCGATGACAAAACGTCTTTGCTAGCATTACAGGCTACTTTCTTTCAAAATTTCGGCTTTGTCATCGGAATGACAGCTAACCATGCAGCTGTCGATGGAAAAAGCTCAGCGGTTTTTCTGCATGCTTGGGCCTACACATGCTCCAAGATCATGCAAAATCCCTCCTTGTCATCAGTACCTTTACCTGAAATTCTAACACCGTTTCTTGACAGGTCCGTTATAAAGGACCCAAAAGGACTCGCCCAATCGTTCGTCGACACATGGGTGAACTTTTTTCGACCAAACAGTAGGAGCGTCTGGGAAACCAATAACAACGACGAATCAATCAAAGGCGTGTTTAAATTGAAGCCCTCGCATATTGAAAAGCTCAAGAATTATGCAAAATCCAAAACCGGCATTGCTAGGGTTTCAACTTTTTCTGTCGTAACTTCTTATTCGTTATGGTGCTTAGTGAAAACAGAACAACCAGAGAACGAGGAAGTTGTTCTTATGTTCCCTGTGGATTTTAGATCAAGATTGGAAGCAGTTCCTCCAGCTTATTTCGGTAACTGCATCTTGCCTCGTTTGGTTTCCGAAGAGAAAGAGAAGGTGATATCGAACGAAGGATTCATTACCGTGCTGAAAGGGATAAGCGACGTTTTGATTGGGTTGGAGAGTGAGGTTTCCTATGACGAAGAAAAATGGAAGAAGAATGTTGTATCTGCATTGGTGGAAGGGAAGAGAATGTACTCCGTTGGTGGTTCAATCCGGTTTACGCTTTATGGGATTGATTTTGGATATGGAAGACCTAAGAAAGTTGATGTTACTTCTGTGGATTTAGTTAGAGCTTTTGCACTTTCTGATAGTAGAGATGGTGACGGGATAGAGGTTGCTGAGGTTACTACTGGTGCCGCTGGTGGGTGGGGATCGTCCGAGTTTGTGCAGTTTAGGTGTTGCCCATATTTATCCCGACACTACGGTTAG 1386 0.4466 MMAQIPSAPLIRVHEVYKVRPSQTTIETTTLPLTYFDLIWPMLPLVQCILFYEFPANQTIYFFDSVVPNLKRSLELTLQHFFPLAGNISRPQHSLIPTITYVPQQDSVSLTICESNDDFDQISSDFCEISKRHRLLPSLSVSDDKTSLLALQATFFQNFGFVIGMTANHAAVDGKSSAVFLHAWAYTCSKIMQNPSLSSVPLPEILTPFLDRSVIKDPKGLAQSFVDTWVNFFRPNSRSVWETNNNDESIKGVFKLKPSHIEKLKNYAKSKTGIARVSTFSVVTSYSLWCLVKTEQPENEEVVLMFPVDFRSRLEAVPPAYFGNCILPRLVSEEKEKVISNEGFITVLKGISDVLIGLESEVSYDEEKWKKNVVSALVEGKRMYSVGGSIRFTLYGIDFGYGRPKKVDVTSVDLVRAFALSDSRDGDGIEVAEVTTGAAGGWGSSEFVQFRCCPYLSRHYG 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151112g00009 461 Gene3D - 247 436 IPR023213 -
Stsc151112g00009 461 PANTHER - 11 432 - -
Stsc151112g00009 461 Pfam Transferase family 15 432 - -
Stsc151112g00009 461 SUPERFAMILY CoA-dependent acyltransferases 254 412 - -
Stsc151112g00009 461 Gene3D - 11 239 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151112g00009 Stsc-Chr151112 77288 80911 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151112g00009 11 404 Monolignol Biosynthesis Gene Families AT5G48930 26.202 2.27e-18 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151112g00009 - - gmx:100800849 365.54