Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151111g00019 ATGAAATCACAGTATGTTACAAGTTCTCAAGGTTATGAGATTGTAAGCTACAACAATGGCACCATAGCAAGCATAGACTCAATCAAATCCTGCACCAGAATCAATGTCCCATTCCCTTGTGAGTGCATCAATGGTGAGTTTCTTGGGCATGTGTTCCAATACTCAGCTTCGAGCACTGACACCTATTATACCATTGCAAACTTTAGCTATTCCAACTTGGTCACTGCTGAGTGGTTGCAGAACACTAATACTTATCCACCAGATAATATTCCTTTTTCTGCAACTGTTAATGTCACTGTTAATTGTTCCTGTGGGAATCCTGATGTTAGCAAGGACTATGGGTTGTTCATCACTTACCCTCTTAGGCCTGGGGATTCTTTGGAGTCAATTGCAAGAAATACAAAGATTGGTGCTGAGTTGCTGCAGGGATATAACCCTGGTGTGAATTTCAGCAAAGGGAGTGGTCTGGTTTATATTCCTGGCAAAGACAAAAATGGCAACTATGTTCCCTTTACATTAAGAAAAAAGAAGATATGGAATAAAAAATTGGTACCTGAAGATTCCAGTGAGCACTTTGTTCCCCAAGGTGAAGCCTCTCAAAATGCCGAAAAGGGAACTTTGGCTTCTTATGAGACTAGTATTATAGGTGTTAAGGTAGAAAAATCAGCAGAGTTTTCATATGAGGAACTAGCCAATGCCACAAATAACTTCAGTTTGGCTAACAAAATTGGTCAAGGTGGTTTTGGCGAAGTCTATTATGGAGTCCTCAATGGCGAGAAAGCTGCAATAAAAAAGATGGACATGAAAGCATCAAAAGAATTTCTCGCCGAACTGAAAGTGTTGACACGCGTTCATCACTTAAACCTGGTACGCTTGATTGGATATTGCGTCGAGGGCTCTCTTTTCCTTGTGTATGAATACATTGAAAATGGAAACTTAAGCCAACATCTAAGAAGTTCAGGTTATGTTCAGAGTTCAGACATCAGTGCTTATTCATAA 999 0.3994 MKSQYVTSSQGYEIVSYNNGTIASIDSIKSCTRINVPFPCECINGEFLGHVFQYSASSTDTYYTIANFSYSNLVTAEWLQNTNTYPPDNIPFSATVNVTVNCSCGNPDVSKDYGLFITYPLRPGDSLESIARNTKIGAELLQGYNPGVNFSKGSGLVYIPGKDKNGNYVPFTLRKKKIWNKKLVPEDSSEHFVPQGEASQNAEKGTLASYETSIIGVKVEKSAEFSYEELANATNNFSLANKIGQGGFGEVYYGVLNGEKAAIKKMDMKASKEFLAELKVLTRVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSQHLRSSGYVQSSDISAYS 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151111g00019 332 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 10 322 IPR044812 GO:0019199|GO:0045087
Stsc151111g00019 332 Pfam Protein tyrosine and serine/threonine kinase 239 320 IPR001245 GO:0004672|GO:0006468
Stsc151111g00019 332 ProSitePatterns Protein kinases ATP-binding region signature. 243 265 IPR017441 GO:0005524
Stsc151111g00019 332 SMART tyrkin_6 237 331 IPR020635 GO:0004713|GO:0006468
Stsc151111g00019 332 FunFam LysM receptor kinase 2 216 307 - -
Stsc151111g00019 332 CDD LysM 117 149 IPR018392 -
Stsc151111g00019 332 ProSiteProfiles Protein kinase domain profile. 237 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151111g00019 332 SUPERFAMILY Protein kinase-like (PK-like) 218 322 IPR011009 -
Stsc151111g00019 332 Gene3D Phosphorylase Kinase; domain 1 209 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151111g00019 Stsc-Chr151111 103739 105699 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151111g00019 14 321 Receptor kinase-like Gene Family AT3G21630 53.509 2.82e-118 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Stsc151111g00019 PK_Tyr_Ser-Thr 4.6e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151111g00019 - K13429 gmx:100803042 408.683