Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151111g00018 ATGAAATCACAGTATGTTGCAAGTTTCCAAGGTGATGAGATTGTAAGCTACAACAATGGCACCATAAAAAGCAAAGACTCAATCACATCCTCCACCAGAATCAATGTCCCATTCCCTTGTGAATGTATCAATGGTGAGTTTCTTGGGTATGTGTTCCAATACTCAGTTTTGAGCACTGACACCTATGATACCATTGCAAACTTTAGCTATTCCAACTTGGTCACTGCTGAGTGGTTGCAGAACACTAATACTTATCCACCAGATAATATTCCTTTTCCTGCAACTGTTAATGTCACTGTTAACTGTTCCTGTGGGAATCCTGATGTTAGCAAGGACTATGGGTTGTTCATCACTTACCCTCTTAGGCCTGAGGATTCTTTGGAGTCAATTGCAAGCAAGACAAAGATTGGTGCTGAGTTGCTACAGGACTATAACCCTGGTGTGAATTTCAGCAAAGGGAGTGGTCTGGTTTATATTCCTGGGAAAGACAAAAATGGCAACTATGTTCCCTTTACACTAAGCAATGGAGAAAAAGGCCTATCCGGTGGCATTATCGCCGGAATATCTGTTGGAGTAGTAGCAGTACTTCTGCTGTTAGGACTTTTTGTTTATGTTACATGTTACAGAAGAAAGAAGACATGGAATAAAAAACTGGTAGCTGAAGATTCCAGTGAGAACTTTGTTCCCCAAGGTGAACCCTCTCATAATGCTGAAAATGGAACTTCAGCTTCTTATGATGCTAGTATTATAGGTGTGAAGGTAGAAAAATCAGCAGAGTTTTCGTATGAAGAACTAGCCAATGCCACAAATAACTTCAGTTTGGCTAACAAAATTGGTCAAGGTGGTTTTGGTGAAGTCTATTATGGAGTGCTCAACGGCGAGAAAACTGCAATAAAAAAGATGGACATGAAAGCATCAAAAGAATTTCTCGCGGAACTGAAAGTGTTGACACGTGTTCATCACTTAAACCTGGTACGCTTGATTGGATACTGCGTCGAGGGCTCTCTTTTCCTTGTGTATGAATACATTGAAAATGGAAATTTAAGCCAACATCTAAGAAGTTCAGATAATGAGCCTTTGCCATGGTCTACCCGGGTTCAAATAGCTCTGGACTCGGCCAGAGGACTTGAATACATTCATGAGCATACTATGCCTGTATATATCCATCGCGATGTAAAGTCGGAAAATATTTTATTAGACCGAAACTTCCGTGGAAAGGTTGCGGATTTTGGACTGACCAAGCTAATTGATGTGGGAAGTTCATCAGCTCCAACTGCTAACATGGCAGGCACATTCGGCTACATGCCACCCGAATATGTATATGGAAGTGTTTCTCCCAAAATAGATGTTTATGCTTTTGGAGTTGTTCTCTATGAACTTATTTCTGCAAAAGAAGCTGTGATGAGGAGTGGCGGCGAATCCCGTCCTGAATTGAAGGGCCTTGTAGCTTTGTTTGAGGAAGTTTTTAACCAGCCTGACCCCAAAGAAGGTCTTAAACAACTGATAGCACAACTTGCCAAGGCATGTACGGAGGCAGATCCGCAGCGGCGTCCGAAGATGAGATCGGTGGTGGTTGCTCTGATGACACTAAGTTCAACCACTGAGAATTGGGACATTGCTTCCTTCTATGAAAATCCAGTTCTTGCAAATCTCATGTCTGGTAGATAG 1668 0.4191 MKSQYVASFQGDEIVSYNNGTIKSKDSITSSTRINVPFPCECINGEFLGYVFQYSVLSTDTYDTIANFSYSNLVTAEWLQNTNTYPPDNIPFPATVNVTVNCSCGNPDVSKDYGLFITYPLRPEDSLESIASKTKIGAELLQDYNPGVNFSKGSGLVYIPGKDKNGNYVPFTLSNGEKGLSGGIIAGISVGVVAVLLLLGLFVYVTCYRRKKTWNKKLVAEDSSENFVPQGEPSHNAENGTSASYDASIIGVKVEKSAEFSYEELANATNNFSLANKIGQGGFGEVYYGVLNGEKTAIKKMDMKASKEFLAELKVLTRVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSQHLRSSDNEPLPWSTRVQIALDSARGLEYIHEHTMPVYIHRDVKSENILLDRNFRGKVADFGLTKLIDVGSSSAPTANMAGTFGYMPPEYVYGSVSPKIDVYAFGVVLYELISAKEAVMRSGGESRPELKGLVALFEEVFNQPDPKEGLKQLIAQLAKACTEADPQRRPKMRSVVVALMTLSSTTENWDIASFYENPVLANLMSGR 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151111g00018 555 Gene3D Phosphorylase Kinase; domain 1 245 342 - -
Stsc151111g00018 555 FunFam LysM receptor kinase 2 251 342 - -
Stsc151111g00018 555 FunFam PTI1-like tyrosine-protein kinase 3 343 541 - -
Stsc151111g00018 555 SUPERFAMILY Protein kinase-like (PK-like) 253 527 IPR011009 -
Stsc151111g00018 555 ProSitePatterns Protein kinases ATP-binding region signature. 278 300 IPR017441 GO:0005524
Stsc151111g00018 555 SMART serkin_6 272 529 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151111g00018 555 Pfam Protein tyrosine and serine/threonine kinase 274 526 IPR001245 GO:0004672|GO:0006468
Stsc151111g00018 555 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 8 540 IPR044812 GO:0019199|GO:0045087
Stsc151111g00018 555 ProSiteProfiles Protein kinase domain profile. 272 530 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151111g00018 555 ProSitePatterns Serine/Threonine protein kinases active-site signature. 387 399 IPR008271 GO:0004672|GO:0006468
Stsc151111g00018 555 Gene3D Transferase(Phosphotransferase) domain 1 343 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151111g00018 Stsc-Chr151111 99003 102102 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151111g00018 12 555 Receptor kinase-like Gene Family AT3G21630 57.143 0.0 631
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Stsc151111g00018 PK_Tyr_Ser-Thr 5.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151111g00018 K13429 - gmx:100803042 728.783