Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151111g00006 ATGACGCGTTCTTCCATTATTGCATACCCAGCCACCACCTCCATTCACAATAATATCAACATAAAAATTAAAAACCAGTTCAACAGCAACAACCATCACACCATGGCCACAACCACAACCACCAGAGTTTCCTCCTCCTTCTTCTTCTGGTTCTTGTTCTTCCTTACCTTAACAGAAGGGCAACAGATATACGTGAACAACGATCAACTAAACTGTGACACCATAACCAACTCAACCTTAGGCAACACCTGCAACTCCATCCCAACATGCCAATCCTACCTCACTTTCAAATCCTCCACCAATCACAACACACCCTCCAAAATCTCCACCCTCCTCAACACCACACCCAACCTCATAACCACCTCTAACAACCTCTCAACCGTCTCTGACGTCATCCCAACCGACACCCTCATCACCATCCCCATCACCTGCTCATGCTTCAACAACACATACTACCAGCACAACACAACATACAAGATCTCCGATGACGACACCTACTTCAGCCTCGCCAACAACACCTTCGAGGCTCTCACCACGTGTCAGGCTCTCATTGCTCAGAACCCTTCCTTCCCCGAACGGAACCTTCACGGTGGCGAGCTTGTCCACGTGCCTCTCAGGTGCGCGTGTCCCACCACAAAACAGCGTGATGCTGGCTTCAAGTACTTGCTAACTTACTTGGTTTCCCTCGGTGAATCCATTTCCTCCATTGCTGAGATCTTCGGGGTTGATGAACAGAGCGTTTTGGATGCCAATGAGCTCTCTGAAACTTCGGTTGTTTACTACTTCACTCCGATCTCTGTTCCTCTCAAAACAGAGCCGCCAAAGAAGTTGCAGAGGGTGGCGCCGTCGCCGGAGTCTCCTCCGCCGCCGGCGGAGACTCCACCAAGCGGTGGCTCAGGGAATTCAAAGAAATGGGTGGTTGTTGGTGTTGTAATTGGTGTTGTGGTTCTTCTTCTTGTTCTGGGTTTTGTTCTGTTCTTCATATGCTTCCGCCGCCGGAGGCTGGAGACGGCGGAGGAGGCGGCAAAGGCGAAGACTTTCTTGGACTCTACCAGCACTGAAGAAGTCAAAAAGGGTTCTTTGGATGTTACTACTACTACAAATAGCTCCTCTACTACTCAATCTTGGTCTATTTCTTCTGAAGGTATACGCTATGCTGTTGAGTCTTTGACAGTTTACAGATTCGAGGAACTGCAGAAAGCGACGGGGTTCTTCGGGGAGGATAATAGAATCAAGGGGTCTTCTGTTTATAGGGCTTCTTTTAAAGGTGATGATGCTGCTGTGAAGATTCTCAAAGGTGATGTTTCTGCTGAGATCAACATTCTTAAGATGATCAACCACACCAATGTTACAAGGTTGTCTGGTTTTTGTGTCCACAAAGGTAACACTTATCTTGTTTATGAGTTTGCTGAGAATGGTGATCTTGATGACTGGCTTCATAATCATGGTAATAATAAGAAGAAAGATGTGGATTTGGATTCTGATTCTGTGGGTTTGAGTTGGAAGCAAAGGGTTAGGGTTGCTCATGATGTTGCTGATGCACTTAACTATCTTCACAACTATACAAACCCTTCCCATGTTCATAAGAATTTGAAGAGTGGTAACATTCTATTGGATGGTAATTTTAGGGCTAAAGTTTCAAACTTTGGGCTTGCAAGAGCAGTTGAGGATGAAGGTGAATATGGGGATGGAGGGTTCCAATTGACAAGGCATGTTGTTGGGACACAAGGTTACATGGCACCTGAATACATTGAGAATGGTGTGATCTCACCAAAGATGGATGTTTTTGCATTTGGGGTTGTGATTTTGGAGCTTCTTTCAGGAAGGGAAGCCGTTGGATTCGGTGAGGATCGGCAAGTGTTGTTGTCATCAACTATAGGGCAAGTTCTTGAAGGAGATAGTGTTAGACAAAATCTTAGAGATTTCATGGATCCTTCTTTGAAGGGTGTTTACCCTCTGGATTTGGCATATTCTATGGCTGAATTGGCCAGAAAGTGTGTTGTCCGTGACATCAATTCAAGACCAAACATCTCTGAGGTTTTCATGACTTTGTCTAAGATTCAATCATCTACATTGGATTGGGATCCCTCAGATGAGCTTGAACGATCTAAATCAGTTGGCAAAATGTCTGATAGCTGA 2139 0.4544 MTRSSIIAYPATTSIHNNINIKIKNQFNSNNHHTMATTTTTRVSSSFFFWFLFFLTLTEGQQIYVNNDQLNCDTITNSTLGNTCNSIPTCQSYLTFKSSTNHNTPSKISTLLNTTPNLITTSNNLSTVSDVIPTDTLITIPITCSCFNNTYYQHNTTYKISDDDTYFSLANNTFEALTTCQALIAQNPSFPERNLHGGELVHVPLRCACPTTKQRDAGFKYLLTYLVSLGESISSIAEIFGVDEQSVLDANELSETSVVYYFTPISVPLKTEPPKKLQRVAPSPESPPPPAETPPSGGSGNSKKWVVVGVVIGVVVLLLVLGFVLFFICFRRRRLETAEEAAKAKTFLDSTSTEEVKKGSLDVTTTTNSSSTTQSWSISSEGIRYAVESLTVYRFEELQKATGFFGEDNRIKGSSVYRASFKGDDAAVKILKGDVSAEINILKMINHTNVTRLSGFCVHKGNTYLVYEFAENGDLDDWLHNHGNNKKKDVDLDSDSVGLSWKQRVRVAHDVADALNYLHNYTNPSHVHKNLKSGNILLDGNFRAKVSNFGLARAVEDEGEYGDGGFQLTRHVVGTQGYMAPEYIENGVISPKMDVFAFGVVILELLSGREAVGFGEDRQVLLSSTIGQVLEGDSVRQNLRDFMDPSLKGVYPLDLAYSMAELARKCVVRDINSRPNISEVFMTLSKIQSSTLDWDPSDELERSKSVGKMSDS 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151111g00006 712 MobiDBLite consensus disorder prediction 693 712 - -
Stsc151111g00006 712 MobiDBLite consensus disorder prediction 280 295 - -
Stsc151111g00006 712 Gene3D Transferase(Phosphotransferase) domain 1 470 704 - -
Stsc151111g00006 712 ProSiteProfiles LysM domain profile. 223 267 IPR018392 -
Stsc151111g00006 712 FunFam PTI1-like tyrosine-protein kinase 3 470 698 - -
Stsc151111g00006 712 ProSiteProfiles Protein kinase domain profile. 350 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151111g00006 712 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 47 697 - -
Stsc151111g00006 712 SUPERFAMILY Protein kinase-like (PK-like) 373 681 IPR011009 -
Stsc151111g00006 712 MobiDBLite consensus disorder prediction 695 712 - -
Stsc151111g00006 712 Pfam LysM domain 225 261 IPR018392 -
Stsc151111g00006 712 Pfam Protein kinase domain 433 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151111g00006 712 MobiDBLite consensus disorder prediction 273 300 - -
Stsc151111g00006 712 Gene3D Phosphorylase Kinase; domain 1 364 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151111g00006 Stsc-Chr151111 24554 26855 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151111g00006 35 707 Receptor kinase-like Gene Family AT2G33580 48.867 0.0 605
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Stsc151111g00006 Pkinase 2.4e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151111g00006 - - tpra:123921078 774.237