Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151111g00004 ATGGAGATCCTTAGACTACTTATCTTGTCAAGTAACTTGCACCTTCCACTTGGCCTAAAATGTCTCTCCAGTGGATTAAAAGTCCTTGTGTGGAGGGAATGTCCCTTAAAAGCTTTACCACTTGGAGTCCCCCTGGATGAACTTGTTCACCTCGAAATTCCTCAGAGCAATCTACATCAACTTTGGAATGGAACACAGTACTTTGCTAAGATGAAATCCATCTATTTGAGTCATTCTCAAAACCTGACTAGTACTCCGGATTTATCCGGAATCCCCAATCTGGAAATACTGTATCTTGATGAATGCATAAACCTGTTTGAGGTTCATCCATCCCTTGGAAAGCACAAAAAGCTTGTCAAAGTGTCATTAGCTGACTGCAAAAATCTCAAAAAACTTCCAAGGAAATTGGAAATGGAATCTCTGCAGTGGTTAGACCTCCATGGCTGCACAAATGTCAGAAAGCTTCCTGAGTTTGGTGAAGATATGGTACATCTAGAGGAGCTCGATTTACGCAACATCGCCATAGCAGAATTGCCTCCTTCTCTTGGTCATGTAACCGCGCTTCGCAGTTTGAATTTAGAGAGTTGTAAAAATCTCCTTAGCTTGCCAAAAACTTTTGGCAATTTGAAATCTCTCACAAAGCTCAATATCTGTTGTTGCTCAAACTTCTCTAAGCTACCAGAGAATTTAAATGAAAATGAAGCATTGGAATATCTTTTTGCAAGTTTAACTGCATTAAGAGAAATACCTCCTTCTATTGTTCATTTGAAGAACCTTATGTGCCTCACTCTATCTGGATGTAAAGTTCAGGAAACTTCCAACTCATGGAACATCATTCTACCAATAGCACAGATATTTGGCTTCAAGAGCAATCATCCAACTGTTTCAATGAGCTTGGTGTTGCCTCCTTCTATGTCAGGTATGAGAATGTTGAAGGAACTGAGTTTGCAGAATTGCAATCTCCATGATGGATCAATTCCTTATGATCTCGGCTGCTTGTCTTCGCTCGAGTCTTTAGATCTAAGCAAAAACAATTTTGTAAACCTGCCTGATGGATGCTTCTCTAAACTCTTTAAACTAACACACCTTTACATGTATGATTGCCAAAGCCTTGTGTCATTACCTGATCTTCCACCAAATGCAGCACATGTTTCCTTGTATAATTGTCCGCGCCTCGAGTCACTGCCTAAGCTTCCACCAACAATGCAGCGAGTAGAAGCACACCAGTGTGCTTCACTGAAACCTTTATCAGATCCAGAACAGATATGGAGTCTATTGGCAGCAATTGACATTGAGGAGATGGAGGATCCTGAAGCCTCAATGAAATTCTCTCGGTTTCGGCCTATATTGGAGATTCCTGGAACAGAACTTCCAGCATGCTTTGAGAATGAAGATTCTTTTGTGCCAGACAAGCAATTCCTAGAACATTTCGGAATCCAAGCTGAGTCGGCGGTGTCAATAATTCTGGAAATACCAGAATCTTGTAGCCAGAGTGAGTTTTGGGGGATTGCTGTGTGCCTTGTGGTAGAAGGCAATCCAGAATATGCACCATTGCAGTACTATGATGGCCTATATTGCCATAATCAAGTTCACACTCCTAATACTGAACAAAAACAGGAAATCAACCTTGAAGATGCTGAATGGATCAAGTGGATACCAAATTACAAATGCCCTCACCTTTTGATGTATTATTATGCTGTTAACTTTTGGCAACATGATGAGAACAGTGTTAAGCTAATGTTTTATGCTATAAACAACAATGGCACAGGGAATAAGATGATGGTTGAAGGGAGTAGCAGTAGTAATAGTAAAAAATGTTCAAAAATAAAGAAGTGTGGTGCACGTTTGTTATCTAAGGTGGGTGCTGGTTCTGTGAAGAAGACACCAAATCCATACAGCAATGAAGGATTTCCACCAAGCAAAGCTCCCAAAGTTACACCTGAAGGAATGTATGTGGCCACTGCTTATGCAAAGACCACATTTAGATGA 1989 0.4057 MEILRLLILSSNLHLPLGLKCLSSGLKVLVWRECPLKALPLGVPLDELVHLEIPQSNLHQLWNGTQYFAKMKSIYLSHSQNLTSTPDLSGIPNLEILYLDECINLFEVHPSLGKHKKLVKVSLADCKNLKKLPRKLEMESLQWLDLHGCTNVRKLPEFGEDMVHLEELDLRNIAIAELPPSLGHVTALRSLNLESCKNLLSLPKTFGNLKSLTKLNICCCSNFSKLPENLNENEALEYLFASLTALREIPPSIVHLKNLMCLTLSGCKVQETSNSWNIILPIAQIFGFKSNHPTVSMSLVLPPSMSGMRMLKELSLQNCNLHDGSIPYDLGCLSSLESLDLSKNNFVNLPDGCFSKLFKLTHLYMYDCQSLVSLPDLPPNAAHVSLYNCPRLESLPKLPPTMQRVEAHQCASLKPLSDPEQIWSLLAAIDIEEMEDPEASMKFSRFRPILEIPGTELPACFENEDSFVPDKQFLEHFGIQAESAVSIILEIPESCSQSEFWGIAVCLVVEGNPEYAPLQYYDGLYCHNQVHTPNTEQKQEINLEDAEWIKWIPNYKCPHLLMYYYAVNFWQHDENSVKLMFYAINNNGTGNKMMVEGSSSSNSKKCSKIKKCGARLLSKVGAGSVKKTPNPYSNEGFPPSKAPKVTPEGMYVATAYAKTTFR 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151111g00004 662 SMART LRR_typ_2 333 356 IPR003591 -
Stsc151111g00004 662 SMART LRR_typ_2 162 185 IPR003591 -
Stsc151111g00004 662 SUPERFAMILY RNI-like 59 372 - -
Stsc151111g00004 662 ProSiteProfiles Leucine-rich repeat profile. 335 356 IPR001611 GO:0005515
Stsc151111g00004 662 Gene3D Ribonuclease Inhibitor 288 432 IPR032675 -
Stsc151111g00004 662 Gene3D Ribonuclease Inhibitor 1 158 IPR032675 -
Stsc151111g00004 662 Gene3D Ribonuclease Inhibitor 159 281 IPR032675 -
Stsc151111g00004 662 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 59 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151111g00004 Stsc-Chr151111 16594 19096 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151111g00004 12 259 WRKY Transcription Factor Family AT4G12020 32.812 5.09e-30 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151111g00004 - - adu:107496788 1162.13