Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151110g00011 ATGCCAGTTTACTTGGGAGCTTATGATGACGAGGAGGCAGCTGCTAGAGCATACGATCTTGCTGCTTTGAAATACTGGGGTCCAGGAACGCTTATTAACTTCCCAGTGACTGATTATAAAAGAGATCTTGATGAAATGCAAAATGTTTCCAGGGAGGATTACCTTGCCTCTTTGCGTAGGAAGAGCAGTGGTTTTTCAAGAGGAATATCAAAATATCGTGCACTCTCCAGTCGATGGGAGCCATCATATGGTCGTATAGCAGGATCGGATTACTTCAATAGCATGCATTATGGTGATGATTCAGCAGCAGAAAGTGATTACATGAGTGGTTTCTGTATAGAAAGAAAGATTGATTTAACTAGTCACATCAAGTGGTGGGCATCTAATAAAAATCGACAACCTGATAGTGGGACAAGATTATCAGAGGAAAAGAAACATGGATTTGCTGGAGATGTTTGTAGTGAACTTAGAACACTAGAGCAGAAAGTCCAACCTACTGAACCATACCAAATGCCAGAATTAGGTCAGCCCCACAATGAGAAAAAACATAAAAGTTCTTCAGGATCTGCCTTAAGTATTCTCTCACAATCTGCTGCTTACAAGAGCTTGCAAGAGAAAGCAGCCAAGAGACAAGAGAATAGTACAGAAAATGATGAGAACGAAAACAAGAATATAGTCAATAAGTTGGATCATGGCAAAGCAGTTGAGAAATTATCAAATCAGGAGGGTGGAAATGACCGACTTGACATTGCAATGGGAATGAGCGGAGCATTGTCACTTCAGAGAAATGTTTACCCGTTGACTCCATTCTTGTCTGTGGATCAATTGGGAGATCCCGTTCTTTGGACATCTATTGTTCCCATACTTCCAGCTGGCATGATTCCTCGTACAACGGAGGCTACCAAGACCGAGACCAGTTCAACGTACACTATGTTTCAGCCAGAGGAGTGA 951 0.4196 MPVYLGAYDDEEAAARAYDLAALKYWGPGTLINFPVTDYKRDLDEMQNVSREDYLASLRRKSSGFSRGISKYRALSSRWEPSYGRIAGSDYFNSMHYGDDSAAESDYMSGFCIERKIDLTSHIKWWASNKNRQPDSGTRLSEEKKHGFAGDVCSELRTLEQKVQPTEPYQMPELGQPHNEKKHKSSSGSALSILSQSAAYKSLQEKAAKRQENSTENDENENKNIVNKLDHGKAVEKLSNQEGGNDRLDIAMGMSGALSLQRNVYPLTPFLSVDQLGDPVLWTSIVPILPAGMIPRTTEATKTETSSTYTMFQPEE 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151110g00011 316 SUPERFAMILY DNA-binding domain 3 36 IPR016177 GO:0003677
Stsc151110g00011 316 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 3 209 - -
Stsc151110g00011 316 ProSiteProfiles AP2/ERF domain profile. 1 35 IPR001471 GO:0003700|GO:0006355
Stsc151110g00011 316 SMART rav1_2 2 41 IPR001471 GO:0003700|GO:0006355
Stsc151110g00011 316 Gene3D AP2/ERF domain 2 37 IPR036955 GO:0003700|GO:0006355
Stsc151110g00011 316 MobiDBLite consensus disorder prediction 202 225 - -
Stsc151110g00011 316 MobiDBLite consensus disorder prediction 163 189 - -
Stsc151110g00011 316 MobiDBLite consensus disorder prediction 205 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151110g00011 Stsc-Chr151110 67826 70318 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151110g00011 3 312 AP2-EREBP Transcription Factor Family AT2G41710 53.824 8.30e-97 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151110g00011 K09285 - gmx:100814117 498.819