Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151110g00004 ATGGAGAATTGCTTAAGAAGTAGGGTTCATGATATCAACATGGCTTCAAGAAAAGCTGAAGAAGCAGCTTGGAGACGCTATGAGGCAACACAGTGGTTAGAAAGTCAAGTAGGTCCTCTTGGTATATCCAAGAAGCCCTCTGAAAGGGAACTCATTTCTTGCTTGAGAAATGGCCTCATTCTTTGCAAAGTCATGAACAAGATTTTTCCAGGATCAGTCCCTAAGGTTGTGGATATTCCGGTTGTTTCGCAATCATTTACCTGGGATTCCCAGCCATTACCAGCCTTCCAGTACTTCGAAAACGTTCGGAACTTTCTGGATGCCGCAGAAGTGCTAAAGCTTCCAGCTTTTGAAGCTTCTGATCTTGAAAGGGATAGTGTAGAGATGGGATCAGCATCAAAAGTTGTTGATTGCATTCTATCACTTAAAGTACTTCAAGAGTTGAAGCAGACAAACAGGGAGAATGGATCCTCCAACAGGCACTTAAGATCTCCATTACTTCTGCAATCAGCCAGTAGGATTCATTCGAGAGCTGCGGCTGCGTTTCCCTCCGATGCATGTAGGCGATTGGATTTGTCTGCATCAGGGGAAAAGGTGCATTCTGTTGAGAGTAATTTTCACAAACGAGAAGAGGAAAATGTTGAATCACTTGCAAAGCTACTGGTTGATCGCATATTGGAAGCGAAAGAAAATATCGATGGAAACTTTGTTGCTTCTCTCCGTAATGAAAACCTGGATCCTGAAAAACTATTTAATCAAATTATGACAAACTTTTGTGGAGTAAAGCTACCAACGAAGTCCTCTGAGCTGACAATGGCACTAAATGATTCTACAAAAGAAAGAAGTAGCCTAGCTCCTCGTTGCAGTTCCTCTCCTCCATTATCAGATGCTCCATTAGTACCTGAAAGTTCAAAGTGTAACAAAGGTTGCACCGGAAAGTGCATTTGCAATCAGAAGCATATCTTAGCAATGCAAGAAAAAGAACTTCAGGATCTCAAGACTTTAAAGTTGAAAATCAAGAATGATTTTCAAGACATGCAATCACAATTTCGGAGTTTTTTTACTGAATTCGGGAGTCAAATAGAAGATATCGCAACTAAGGCTGGTGGATATCACAGAGTAGTAGAAGAGAATAGGAAATTATATAACATGGTTCAAGATTTGAAAGGTAATATTCGAGTTTACTGCAGAATCAGACCCTCGTTCCAGGCTGAATCCAAGAGTGTTATTGATTTCATTGGGGAGGATGGTTCTTTATTCATTTTAGATCCATCTAAAGCACTGAAAGATGGAAGGAAACTTTTTCAGTTTAATCGGGTTTTTGGTCCAAATGCTAGTCAAGATGAGGTTTTTAAGGACACTCAGCCGTTAATTAGATCTGTGATGGATGGATACAATGTTTGTATTTTCGCATATGGTCAAACTGGATCCGGGAAGACTTACACCATGAGTGGTCCATCAGGTGGAACCTCTAAAGATATGGGGATCAATTATCTCGCTCTTAACGATTTGTTTCGAATGTCTAATGGCAGGAAAGACATTATGACATATAACATTTATGTTCAAATGGTTGAAATTTACAATGAACAAGTCAGAGACCTACTTGCTGAGGACAAAACAGAGAATAAATTAGAGATTCGGAGCTGCAATGATGATGGATTGAGCCTTCCTGATGCTACATTGCGTTCAGTGACATCTACAACTGATGTTCTGACCCTCATGAAACTCGGCGAGGTCAACCGTGCTGTCAGTTCCACTGCACTGAACAATAGGAGTAGTCGTTCACACAGTGTACTAACCGTTCATGTTCACGGAAAAGACACTTCCGGTAACACCATTCGCAGTTGTCTGCATTTGGTGGACCTTGCCGGAAGTGAACGAGTAGACAAGTCGGAAGTCACAGGGGAAAGACTAAAGGAAGCACAATTCATTAACAAGTCTCTTTCTTGTTTGGGAGATGTGATCACAGCACTTGCTCAAAAGAATTCTCACATTCCATATAGAAATAGCAAACTCACACTTCTTTTGCAGGACTCTTTAGGTGGTCACGCCAAAACTTTGATGTTTGCTCATGTGAGTCCCGAAGCCGATTCCTTTGGTGAAACAACGAGTACCCTCAAGTTTGCTCAGCGTGTTTCTACTGTCGAACTAGGGGCAGCACGAATGAACAAAGAAAGCAGTGAAATTATGCAACTTAAAGAACAGGTTGAGAATCTTAAGATGGCATTGGCAAACAAAGAAAATCAGAAAGCAGTGTTCAGCAGAACCAAAGAACCATACACTCCCTTAGAGAAACCAACCATGAAAACTCCATTGCGTTCTAGAAGACTCAGTGTTGAGAATTGCAGCACCGCGAAGGGCGAGAAATCTGTGAATCCTGAGGACAAAGGTGCATGCAAATCGCCTTCGTTTGTACCTCGTTCGAGAAGGTTGAGCTTGGAAGGTTCAAAAAGCAACATCAAGAAAGACGGCGCGCCATCCGATGTTAGCAAGACTTTACAGTATGAGTCCATGCTTGTGCAGAAATATCATCCACCACAAGATCCAGAAGCTGCAACCAAGCTTCATGGCCACTTCAGCAATGGCAATTCCAAGCAAGATTCGCAGGCCAAAGCTCCGCGAAGTCCTACAAGCATTTCCTACCAAAAGAGACTGATAAAAGTAGATGAAGGGATCAACATTCATCCTCTTGTACTGCCACAGACACCGGAACCAACAATGCCGGATATCAATGATGTTCATAGTTCTGTGCAGACAACAAAGGGAATAAGTAGCACAAATGGAAAAGGATCATTGAGAAGATCCTTGAGAACAATTGGAAAACTTATTAATGGCCCTGAAAAGAGGAACCAACAGAATTTGGTTGAAGTAAAGTCTCCTATAAAGGGCACAAGCCATGGAAATGATGTAAGATCATCGGTTACAGCTGCTGAGAGGACACAGAGGAGGCAATCGCTAACTGGTATTCAAGGATCCGTGTCGAACCGGAGATCTTCACTCGGAGGGAAGCCAGTACCATATGAGAAGGAGAGGAATGCTAGAACACCTCCTCCGGCAGCGGCCAAGACCGCGAAACGGTGGTTGTAG 3087 0.4247 MENCLRSRVHDINMASRKAEEAAWRRYEATQWLESQVGPLGISKKPSERELISCLRNGLILCKVMNKIFPGSVPKVVDIPVVSQSFTWDSQPLPAFQYFENVRNFLDAAEVLKLPAFEASDLERDSVEMGSASKVVDCILSLKVLQELKQTNRENGSSNRHLRSPLLLQSASRIHSRAAAAFPSDACRRLDLSASGEKVHSVESNFHKREEENVESLAKLLVDRILEAKENIDGNFVASLRNENLDPEKLFNQIMTNFCGVKLPTKSSELTMALNDSTKERSSLAPRCSSSPPLSDAPLVPESSKCNKGCTGKCICNQKHILAMQEKELQDLKTLKLKIKNDFQDMQSQFRSFFTEFGSQIEDIATKAGGYHRVVEENRKLYNMVQDLKGNIRVYCRIRPSFQAESKSVIDFIGEDGSLFILDPSKALKDGRKLFQFNRVFGPNASQDEVFKDTQPLIRSVMDGYNVCIFAYGQTGSGKTYTMSGPSGGTSKDMGINYLALNDLFRMSNGRKDIMTYNIYVQMVEIYNEQVRDLLAEDKTENKLEIRSCNDDGLSLPDATLRSVTSTTDVLTLMKLGEVNRAVSSTALNNRSSRSHSVLTVHVHGKDTSGNTIRSCLHLVDLAGSERVDKSEVTGERLKEAQFINKSLSCLGDVITALAQKNSHIPYRNSKLTLLLQDSLGGHAKTLMFAHVSPEADSFGETTSTLKFAQRVSTVELGAARMNKESSEIMQLKEQVENLKMALANKENQKAVFSRTKEPYTPLEKPTMKTPLRSRRLSVENCSTAKGEKSVNPEDKGACKSPSFVPRSRRLSLEGSKSNIKKDGAPSDVSKTLQYESMLVQKYHPPQDPEAATKLHGHFSNGNSKQDSQAKAPRSPTSISYQKRLIKVDEGINIHPLVLPQTPEPTMPDINDVHSSVQTTKGISSTNGKGSLRRSLRTIGKLINGPEKRNQQNLVEVKSPIKGTSHGNDVRSSVTAAERTQRRQSLTGIQGSVSNRRSSLGGKPVPYEKERNARTPPPAAAKTAKRWL 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151110g00004 1028 MobiDBLite consensus disorder prediction 758 829 - -
Stsc151110g00004 1028 MobiDBLite consensus disorder prediction 846 880 - -
Stsc151110g00004 1028 Pfam Kinesin motor domain 397 714 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc151110g00004 1028 Coils Coil 322 342 - -
Stsc151110g00004 1028 CDD CH_AtKIN14-like 25 143 - -
Stsc151110g00004 1028 MobiDBLite consensus disorder prediction 857 880 - -
Stsc151110g00004 1028 ProSiteProfiles Kinesin motor domain profile. 391 715 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc151110g00004 1028 FunFam Kinesin-like protein KIN-14A 333 717 - -
Stsc151110g00004 1028 Pfam Calponin homology (CH) domain 25 142 IPR001715 GO:0005515
Stsc151110g00004 1028 MobiDBLite consensus disorder prediction 945 1028 - -
Stsc151110g00004 1028 MobiDBLite consensus disorder prediction 774 788 - -
Stsc151110g00004 1028 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 391 749 IPR027417 -
Stsc151110g00004 1028 Coils Coil 722 749 - -
Stsc151110g00004 1028 ProSiteProfiles Calponin homology (CH) domain profile. 23 147 IPR001715 GO:0005515
Stsc151110g00004 1028 SMART ch_5 25 151 IPR001715 GO:0005515
Stsc151110g00004 1028 PANTHER KINESIN-LIKE PROTEIN KLP-3 30 885 IPR027640 GO:0003777|GO:0007018
Stsc151110g00004 1028 MobiDBLite consensus disorder prediction 945 999 - -
Stsc151110g00004 1028 FunFam Kinesin-like protein KIN-14L 11 175 - -
Stsc151110g00004 1028 SMART kinesin_4 389 723 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc151110g00004 1028 SUPERFAMILY Calponin-homology domain, CH-domain 22 152 IPR036872 -
Stsc151110g00004 1028 Gene3D Kinesin motor domain 333 717 IPR036961 -
Stsc151110g00004 1028 PRINTS Kinesin heavy chain signature 665 686 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc151110g00004 1028 PRINTS Kinesin heavy chain signature 464 485 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc151110g00004 1028 PRINTS Kinesin heavy chain signature 616 634 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc151110g00004 1028 PRINTS Kinesin heavy chain signature 586 603 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc151110g00004 1028 Gene3D - 15 148 IPR036872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151110g00004 Stsc-Chr151110 16165 21969 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151110g00004 327 740 Calmodulin-binding Proteins AT5G65930 39.286 7.07e-72 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151110g00004 K10406 - gmx:100786642 1435.24