Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151108g00029 ATGGAGAATTATACATATCCCCCCTACCCGGAATCCAGTGAGTCCTCGCCGCGCTCCAGGGAGGTCGACTTCGAGAATCCCCCGCCGTGGGACGAGCAGCAACCACCGCCGACCAACTACAAGGCCAAGTTCATGTGCAGTTACGGCGGCAAGATCCAGCCCCGCACCCACGACAACCAGCTCTCCTACGTTGGCGGCGACACCAAGATCCTTGCCGTCGACCGCAACATCAAGTTCCCCGCCTTCCTCTCGAAGCTCGCTGCCCTCTGTGACTGCGCCTCGCCGGAGAATCTCACACTCAAGTACCAGCTCCCCGGAGAGGATCTCGACGCCCTCATCTCCGTCACCACCGACGATGACCTCGATCACATGATGCATGAGTATGATCGCCTCTTCCGTGCCTCCGCCAAACCCGCCAGGATGAGGCTCTTCCTCTTCACCGCCTCAACTACCTCCGCTCCGCCTAGTTTCTCCACTGATCGCGATCGCTTCGTTGAGGCTCTCAACTCGGGTCCCGTACCGGTTCAGCCCGACCCGGTCAAATCCCCTCCAGTTGTTCCTGCCAACGTTGATTTTCTATTCGGCCTTGAGAAGGCCGCGCCTCCTCCCCCTCAGACTGCGCCGCCTCTTGCTGCCGTCAAGTTCCACGATCCTGTTCCGGAGCCTGTGGCGCCGCCACCAGAGTACCAGACGCGCGGAGCTGTGAACGATCGCGTTATCGGATCGGATCCCAACGTGAACCCGATCGACGTTCAGAGGCAGTTACAGCAAGAGCTGCAGCGGATGCAGATCGCGGAGAGTGATCAGTCTATGTACCGGAGGAGAAGCGAGGACGGCTTCTCTGCAGGTTATGGCGTTGCTGGAGGCGGTGATTATTACATGCAGAAGATGCCAGACAAGGTTCCCATGTCCAATTCACCTGCTACTGTGCCGCACCCTGGAAATTACTGGCCGGAGAAACAATTTTCAGGCGAAGGTTTCCCCACGGCGATTTCGACGGCTCCCGGAGGTGGAGACCAACAGTTTTACGTGGTTCCGGCGCCGGGAACGTTCTATCATACTCCGATGGTACGTCCGTCGGCGACGCCCGTCACTCAAGGTTACTACGCCGTGCAACGTATGAGTTCTGATGGATACCGTGAGCAGGCAGTGTACGGCGGAGCGCCGCCATCTAAAGCAGCGTTTTCGTCTGCGGGAGCGACAAATTTGGGACAGGGTCCAGCGGTTAAAGCTCCTGGTTATCCAGATGGATACGGCGTCGTTCGGGCAGGTGGAGTGGCGGATAATGCGGGGTCTGGTGCATACGCTCAAGTTGCCTACGATAGTGGTAGTGGGAGACAGGTTTATTATACTGCGCCGGGTGGCGTAATGCACGCACCTCAATATCAAGGGGTTGCTCCACCGGTTACTGGTGATATGAGAACTGTTGCTGCGGGTTCATTGGGCCAGGATGTTAGTAAAGTTGTAAACAAGGCTTCCCAAGGTTCTGTGTGA 1494 0.577 MENYTYPPYPESSESSPRSREVDFENPPPWDEQQPPPTNYKAKFMCSYGGKIQPRTHDNQLSYVGGDTKILAVDRNIKFPAFLSKLAALCDCASPENLTLKYQLPGEDLDALISVTTDDDLDHMMHEYDRLFRASAKPARMRLFLFTASTTSAPPSFSTDRDRFVEALNSGPVPVQPDPVKSPPVVPANVDFLFGLEKAAPPPPQTAPPLAAVKFHDPVPEPVAPPPEYQTRGAVNDRVIGSDPNVNPIDVQRQLQQELQRMQIAESDQSMYRRRSEDGFSAGYGVAGGGDYYMQKMPDKVPMSNSPATVPHPGNYWPEKQFSGEGFPTAISTAPGGGDQQFYVVPAPGTFYHTPMVRPSATPVTQGYYAVQRMSSDGYREQAVYGGAPPSKAAFSSAGATNLGQGPAVKAPGYPDGYGVVRAGGVADNAGSGAYAQVAYDSGSGRQVYYTAPGGVMHAPQYQGVAPPVTGDMRTVAAGSLGQDVSKVVNKASQGSV 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151108g00029 497 MobiDBLite consensus disorder prediction 1 37 - -
Stsc151108g00029 497 MobiDBLite consensus disorder prediction 1 15 - -
Stsc151108g00029 497 CDD PB1_UP2 45 146 - -
Stsc151108g00029 497 Gene3D - 62 148 - -
Stsc151108g00029 497 Pfam PB1 domain 57 147 IPR000270 GO:0005515
Stsc151108g00029 497 SMART PB1_new 56 148 IPR000270 GO:0005515
Stsc151108g00029 497 PANTHER OS05G0427100 PROTEIN-RELATED 9 350 - -
Stsc151108g00029 497 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 61 148 - -
Stsc151108g00029 497 SUPERFAMILY CAD & PB1 domains 57 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151108g00029 Stsc-Chr151108 137703 139616 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151108g00029 41 192 MAP Kinase Kinase Kinase AT3G46920 41.615 3.43e-27 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151108g00029 - - adu:107480527 867.455