Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151108g00022 ATGTTGGAATCTCTAGCTTATTGCCAAACCTTTAAGGGATATGACCTTACGAAGCAGAAGAGTCCAGGATGCTCTCATGGTCTTTCACGCATATGTAGAAGTTCAGTGTTCATGTTTTATTCAGTCAGAAAGCAAGTATCGCCGCAACCCCGATTCGCTGGTCATGGGATAGTTAACAGGAATTCTTTCTCAGAAGGTTTCTTTAGCAGCAAGCCTCTCCCTGTGCCATTGTTTTTGGGAAGTAAAGGATTCTATTCATCTAAGTATTGTTCATCGCGAGGGGAAAGACTACAGACAAATGTAGCATATGATGTTGCTGGTGCTGTTGAAGTCATCAACGATTTAGGATTGGATACTCTTACTTTCTTGGCTGTGACTGTCTTAATTGTGCCCACACTCAAATCAATTAAAACCAGCCCTATACTTGGTTTCTTCTTTGCTGGGGTGGTACTCAATCAGTTTGGTTTAATTAGAAACCTTACAGATGTTAAGATTTTGTCTGAATGGGGGATTCTTTTCTTGCTTTCACTGGCACGTCTTAAAGCTCTTGCAAAATATGCCTTTGGGATGGGATTGCCTCAGGTTCTACTATGTACTTTAGCATTTACTGCTTTTGAACTTCCACCAAATGGGGCTGTTGGAACGAAGATTTTGGAATTCCTTTTCCACTCAAGGCCTGATCTAGTAAACATCAGAAGTGTTGATGAAGCTGTAGTGATTGGTGCTGCTCTATCTCTATCATCATCTGCTTTTGTTCTTCAGTTACTTGCCGAGAAAGGTGAGCTTCCCACAAGATTCGGTTCAGCAACTCTGGGAATACTTCTTTTGCAGGACTTAGCTGTTGTTCCTCTTTTAGTCATTCTTCCAATATTAGAGACCCAGAATATGTCTGAGGAAAGTCTTTGGCCCATGCTTGCTCAAGAAAGTTTAAAGGCATTATTAGGATTGGGTCTTCTTTCTCTTGGGGCAAAGTACATTCTCAGAAGAGTTTTCGAGGTTGTTGCTGATTCAAGGAGCTCAGAGGCTTTTGTTGCTCTTTGCTTGCTGACTGTTGCTGGGATTTCACTAGGCACACAGAATTTGGGCTTCAGTGATACGCTTGGAGCATTTTTGGCTGGAGCAATCTTAGCTGAGACAAATTTCAGGACACAGATTGAAGCAGATATAAGACCATTTAGAGGATTGCTTCTTGGATTATTTTTCGTAACTACAGGAACTTCAATTGACATGCAGCTCCTTTTTCGAGAGTGGCCAAATGTACTTTCACTGTTGGCAGGTTTAATTGCTATCAAGACATTGATCATAACGGCGATTGGTCCTCGTGTCGGACTTACTTTACAAGAAAGTGTGAGAATAGGGTTGTTACTGTCCCAGGGAGGAGAGTTTGGATTTGTAGTTTTCTCATTAGCAAATAGGCTTGGGGTGCTTCCACTTGAGCTTAACAAGCTGCTCATAATTGTTGTTGTGTTGTCAATGGCATTAACCCCTTTTCTGAATGAGGCTGGAAGAAGGGCTGCTAGCTTTTTTGAAGAAAAATCTAATACTGAGAATAAAGCTTCTGAGAAGCTTAACTACAATGTCAGCGAACCTGTTGTTATCCTTGGATTTGGGCAAATGGGTCAGGTCCTCGCAAATTTTCTGGGCAGTCCATTTGCTTCAGGAGTAGACAGTGTTTCGGTAGGATGGCCTTATGTGGTTTTCGATCTTAACCCATCAGTAGTAAAGGAAGCTCAAAAACTTGGTTTTCCCATTGTCTACGGAGACGGATCACGTCCAGCTGTTCTTCAATCTGCTGGTATCTCTTCTCCTAAAGCTATCATGATTATGTACACTGGCAAAAAGAGGACAATTGAAGCTGTTCAAAGGTTGCGTTTGTCTTTTCCCTCGATTCAAATCTACGCAAGAGCTCAAGATCTCAAGCATCTTTTAGATTTGAAGAAAGCTGGTGCGACGGATGCCATTATGGAAAATGCAGAGACTAGCTTACAGCTGGGTTCTAAGCTTCTAAAAGGCCTTGGTGTGATGTCTGATGATGTGGTATTCCTAAGCCAGCTTATTAGGGATTCCATGGAGCTACAAGCTCAGGAAGCAGTTGGTTTATCTGATCGAGACTCAGATATTATGAAACCTCTACAGGTGAGAGTTTCCGACTTGATGGAGGCACGTGTAACGACAGCTTCGCCGGAACATGAACCATCAGAAATGAACCTGAATGATCAAGCTTCATTGGGTCTAATTCAAGAGGAAGTGGTTGCTGAAGAACAAGATTATGAGCTAAAACAAGCTGTGAATTCACAAGGAAATGGTGCTCTAAATGGGAAACAAGGCACTGAAGATCAAATCTCAATCCCTTCCCATAATGCCATGGAGGAACCCTAA 2379 0.4212 MLESLAYCQTFKGYDLTKQKSPGCSHGLSRICRSSVFMFYSVRKQVSPQPRFAGHGIVNRNSFSEGFFSSKPLPVPLFLGSKGFYSSKYCSSRGERLQTNVAYDVAGAVEVINDLGLDTLTFLAVTVLIVPTLKSIKTSPILGFFFAGVVLNQFGLIRNLTDVKILSEWGILFLLSLARLKALAKYAFGMGLPQVLLCTLAFTAFELPPNGAVGTKILEFLFHSRPDLVNIRSVDEAVVIGAALSLSSSAFVLQLLAEKGELPTRFGSATLGILLLQDLAVVPLLVILPILETQNMSEESLWPMLAQESLKALLGLGLLSLGAKYILRRVFEVVADSRSSEAFVALCLLTVAGISLGTQNLGFSDTLGAFLAGAILAETNFRTQIEADIRPFRGLLLGLFFVTTGTSIDMQLLFREWPNVLSLLAGLIAIKTLIITAIGPRVGLTLQESVRIGLLLSQGGEFGFVVFSLANRLGVLPLELNKLLIIVVVLSMALTPFLNEAGRRAASFFEEKSNTENKASEKLNYNVSEPVVILGFGQMGQVLANFLGSPFASGVDSVSVGWPYVVFDLNPSVVKEAQKLGFPIVYGDGSRPAVLQSAGISSPKAIMIMYTGKKRTIEAVQRLRLSFPSIQIYARAQDLKHLLDLKKAGATDAIMENAETSLQLGSKLLKGLGVMSDDVVFLSQLIRDSMELQAQEAVGLSDRDSDIMKPLQVRVSDLMEARVTTASPEHEPSEMNLNDQASLGLIQEEVVAEEQDYELKQAVNSQGNGALNGKQGTEDQISIPSHNAMEEP 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151108g00022 792 MobiDBLite consensus disorder prediction 761 792 - -
Stsc151108g00022 792 FunFam Glutathione-regulated potassium-efflux system protein KefB 528 699 - -
Stsc151108g00022 792 FunFam K(+) efflux antiporter 3, chloroplastic 114 506 - -
Stsc151108g00022 792 Gene3D - 530 699 - -
Stsc151108g00022 792 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 530 668 IPR036291 -
Stsc151108g00022 792 ProSiteProfiles RCK N-terminal domain profile. 530 662 IPR003148 GO:0006813
Stsc151108g00022 792 MobiDBLite consensus disorder prediction 761 784 - -
Stsc151108g00022 792 Pfam TrkA-N domain 531 655 IPR003148 GO:0006813
Stsc151108g00022 792 Gene3D - 114 506 IPR038770 -
Stsc151108g00022 792 Pfam Sodium/hydrogen exchanger family 121 499 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Stsc151108g00022 792 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 101 730 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151108g00022 Stsc-Chr151108 110264 116882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151108g00022 1 779 Inorganic Solute Cotransporters AT4G04850 67.925 0.0 993
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151108g00022 K03455 - gmx:100806734 1145.18