Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151108g00006 ATGAGTCCTGAAACAAGAATGGGAATTATTACTATCCTCATCTACATCCAAATCTTGCTCTGCATTCATGCTACTGAAACAGATATACTCTGTTTAAAATCCATCAAGGATTCCTTGGAAGATCCATATAACTACTTAGCCAGCTGGAACTTCAACAACCAAACCGAAGGTTTCATTTGTGATTTTGTGGGTGTTAACTGCTGGCATCCTGATGAAAACAGAGTGCTAAGCATCGACCTCTCAAACATGGGGCTCAAGGGCCAGTTTCCGCGGGGACTTGATAACTGCACTTCATTAACTGCCTTAGACCTTTCATCAAACACCTTAGGGGCACATCTCCCCTCTGATATTCACGCATTACTCCCTTTTGCTGTCTCCATTGATCTTTCCAATAACAAGTTCAGTGGACAGATTCCACCCTCTTTGGCTAACTGCACTTACCTCAATTCTCTCAAGCTTGATCACAACATGTTCAGTGGTGGAATCCCGCCTCAACTCTCTGCGCTTCCTAGGATTCAAACACTTTCTTTTCATAACAATGAGTTGTCAGGGGAAGTTCCTAACTTGGCATATGGTTCAGTAAGTGTTAGCTATGTTAACAATAGGGTGCTTTGTGGAGGGCCCTTGAAACCATGCTCCTTGGGTGGAGAAGGAGGGCTTATTTTTATGAACCAGTGGTTCAAGGATGGCCTTGTTGTTGGTTTTGCATCATCATTCAGTTTTTTTCTTGTGTGCATCTCTTTCCTTTCAAATAGGTACTGGCCAAAATTACTGAAGTGGATCAAACACAATTACAACCACAACAAAGGTGTTGAACTAGTCAAACATGCGTGTTCCATCATCACAGGGAGAAAGCACGGAATTGAAGCTGATCAGATGCCTGAATTGCTATCTATGCAGTTGCAGGAGAAAGGAAGCCAAAAGATAGCTCTACTACTGGAAAGACTAACATCCACTATGAAGTTTGAAGAACTAAATGATGCAACAGACGGCTTTTCTATAAACAATGCAATTGGGTTTGGAAAGATGGGAATAATGTACAAGGGAACATTAGCTAACGGTTGGCACCTAGCTATTAAGAAACTAACCGATTCTCAACGGTTTGGGAGGCAAGTTCTTATAGAAATAAGGATTCTAGGTAAGCTCCGACACAGAAACATAGTTCCGTTGCTTGGGTTCTGCCTCGAAAATGATGAAAGGATTCTGGTGTACCCATACTTCTCAAATGGAAGACTCTCGAAATGGTTGCACCCTTTGGAAACTGAGGTTCTGATATTGACATGGCCACAGAGGATTAAGATTGCACTTGGTGTGGCTAGAGCCTTATCTTGGCTCCATCATTCATGCAATCTGCATGTGGTGCACTTGAATATATGTTCACAGAGTATCTTGCTAGATAAGAACTTCGAACCCAAGTTATCCAACTTTGGAGATGCCAAGTTTTTGAACCCCAACAATCATGAGAGTCTAGGCATGCCGTTTTATATAAAGGATGGGAAGAAGGATGTTTATGATTTTGGTAATGTAGTTTTTGAGTTGGTCACGGGGAAATTGTATGAGGAATTGATGGAGAGTTCATGTAACAATGCCAATCTATCTCCTAATCCTTCAAGTTTTTATAGTGCAATTGATGAGTTTATTATTGAGAAAGGGTTTGAAACTGAAGCGTTTATGCTCATCAAGGTTGCTTGTGAGTGTGTTCAGCCTTTTCCAGAGCAAAGGCCAACAATGTTTCAAGTCTACAACAAAATGAGCAGTATATGGGAAGAGGGACATGAATTCTGCTGTGATTCTAACAATTGCGCGCCATCAGATTCTTCTGCTACTGATGGTGATGAATTTGTCGAATTATAA 1854 0.4126 MSPETRMGIITILIYIQILLCIHATETDILCLKSIKDSLEDPYNYLASWNFNNQTEGFICDFVGVNCWHPDENRVLSIDLSNMGLKGQFPRGLDNCTSLTALDLSSNTLGAHLPSDIHALLPFAVSIDLSNNKFSGQIPPSLANCTYLNSLKLDHNMFSGGIPPQLSALPRIQTLSFHNNELSGEVPNLAYGSVSVSYVNNRVLCGGPLKPCSLGGEGGLIFMNQWFKDGLVVGFASSFSFFLVCISFLSNRYWPKLLKWIKHNYNHNKGVELVKHACSIITGRKHGIEADQMPELLSMQLQEKGSQKIALLLERLTSTMKFEELNDATDGFSINNAIGFGKMGIMYKGTLANGWHLAIKKLTDSQRFGRQVLIEIRILGKLRHRNIVPLLGFCLENDERILVYPYFSNGRLSKWLHPLETEVLILTWPQRIKIALGVARALSWLHHSCNLHVVHLNICSQSILLDKNFEPKLSNFGDAKFLNPNNHESLGMPFYIKDGKKDVYDFGNVVFELVTGKLYEELMESSCNNANLSPNPSSFYSAIDEFIIEKGFETEAFMLIKVACECVQPFPEQRPTMFQVYNKMSSIWEEGHEFCCDSNNCAPSDSSATDGDEFVEL 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151108g00006 617 SUPERFAMILY L domain-like 26 412 - -
Stsc151108g00006 617 ProSiteProfiles Protein kinase domain profile. 332 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151108g00006 617 Pfam Leucine rich repeat N-terminal domain 27 68 IPR013210 -
Stsc151108g00006 617 FunFam Nuclear pore complex protein NUP107 25 188 - -
Stsc151108g00006 617 Pfam Protein kinase domain 334 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151108g00006 617 Gene3D Phosphorylase Kinase; domain 1 293 406 - -
Stsc151108g00006 617 Gene3D Ribonuclease Inhibitor 25 213 IPR032675 -
Stsc151108g00006 617 Gene3D Transferase(Phosphotransferase) domain 1 407 602 - -
Stsc151108g00006 617 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 31 189 - -
Stsc151108g00006 617 SUPERFAMILY Protein kinase-like (PK-like) 314 582 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151108g00006 Stsc-Chr151108 17470 20007 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151108g00006 18 594 Receptor kinase-like Gene Family AT3G28450 36.349 1.62e-107 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Stsc151108g00006 Pkinase 9.1e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151108g00006 - - adu:107480601 1061.21