Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151108g00001 ATGGCTTCTCGAAACCAGAACAGGCCTCCTCGCAGCCCCTCTCACAAGAAGGCGGGTTCAGAAGAATTATTCTCAGATAAGCGTCGAAGAATCGGAGCTGACAAGATGGAGAGACAAGGAGCCACAGGAAGCAGGACAAGGACCCCGTTTTCATCCGTTAACAACCGCACGGATGCCGCAAGTGATGCCGGAACCGCCGAGCCGTCTGAGTGTGGCACCATTGAGTTCACGAAGGAGGATGTAGAGGCGTTGTTGAATGAGAAGATGAAGAAGGGGAATCCTTATGATAACAAGAAAAAGATGGAGCAGATGACGGATCTGATAAAGAAGCTTAAGCTTTGTGTTCGCTGGTTTAAGAAGATTGAAGAAGGAGATTCCCAAGAAAAGCAGAGGCTTGGTTCTGAACTAGAGGCAGCTCAGAAGAAGTGCAATGATACTGAGGTTGAGATGAAGAATATGATGGAGGAATTGAACAAGAGAATATCTGATTTAGAAGAGAAACTTGCAAAGGAAGAATCAGATAAGTTGGAAGCCAATAATCTTTACAGAGAAGAAAAGGAAGCAAGGAATGCAGCTGAGAAAGTTTGTAAAGAGAAATCAGCTGAGCTTGAGAGGATTCAGGACGAGAAATCGGCCGCAGAGCGAAAGGCTATTTCAAATGAGGACTTGTACAAACGATCACAAGAGTACAATATGAGTCTGCAGCAATACAATAGACGTCTTCAGTCAGATCTTGAAACAGCTAACGAGGCAAATAAAAGGCTTGAAACAGAGAAAGCGACCATTGTTGAAAGCCTTAGCCATGTTAGAGGTCACAATAAGGTCCTGCAGGAGCAGTTGGTGTCTCTAAAAGTTTCACAGAGTGAAGCTCTACACGAGAAAGAAATATCTACAAAGGAACTAAAATGTCTTCGTGAGGAGTTAAAACAAATCAGAGATGACCGTGATTGTCAACAGAAGCAAGTAAAGGATTTAATAGCTGAAGTAGCAAAGTACAAAGAATTTACTGGGGAATCATGTGCCAAATTGGATTCCTTGACAATTAAAACAAATGCTATTGAGGAAACTTGTTCTTCTCAAAGGGAGCAAATATTCATACTGGAGCAGCAGTTGAAAGCTGAAAGGGAGAAGTTAAAGATGGCTGATATGTCTGCATCAGAAACAAGAACAGTGTTTGAAGAGCAGAAAAGAATCATACGTGAGCTTCAGGATAAATTAGCAGATAGAGAATTTCAAATAGTTGAAGGAGAGAAGCTGAGGAAAAAACTGCACAACACCATTCTGGAGCTAAAAGGAAATATTCGTGTGTTCTGCCGTGTACGACCTTTGCTACCAGATGATGGCACAGGAACTGATATGGTTGTTTCTTACCCTACGTCAACAGAAGCACTTGGTCGGGGAATTGATTTGGTTCAAAACGGGCAGAAGTACCCTTTTACATTTGACAAGGTGTTTAATCACGACGCTTCACAGAATGACGTATTCCTAGAGATATCCCAGCTAGTGCAGAGTGCACTTGATGGATACAAGGTGTGTATCTTTGCGTATGGGCAAACAGGTTCAGGCAAAACTTATACAATGATGGGCAGGCCTGATGCGCCAGATTTGAAAGGGTTGATACCACGTTCTCTAGAACAGATATTCCAGATTAGTCAAACTCTGAAAGATCAGGGTTGGAAGTACAAAATGCAGGCATCAATCTTGGAAATTTATAACGAGACCATCAGGGATTTGTTATCAAATAGGTCAAGTGCGATCGACCAGACACGATCAGAGAATGGTGTCCCTGGCAAGCAGTACACGATTAAACATGATGCAAACGGAAACACGCACGTTTCCGATCTAACTATTGTGGATGTTTGTAGTGTGAATGAGATTTCCTCCCTCCTAAAACAGGCTGCCCAATGCAGGTCTGTTGGAAGGACACAGATGAATGAGCAATCATCCAGAAGTCATTTTGTCTTTACTTTGCGTATATGTGGGATAAATGAGAACACTGAACAACAAGTACAAGGTGTCTTAAATCTGATTGATCTTGCTGGAAGTGAAAGACTATCAAGGAGTGGGGCAACTGGGGACCGGTTGAAGGAAACTCAGGCTATCAACAAAAGTCTCTCATCCTTGAGTGATGTAATATTCGCTTTGGCAAAGAAAGAGGAGCATGTTCCTTTCAGGAATTCAAAACTTACATACCTTCTTCAGCCATGCCTTGGTGGTGATTCCAAAACATTGATGTTTGTCAACATCGCACCCGATCAATCATCAACCAACGAGTCGCTTTGCTCGCTACGTTTCGCGGCCAGAGTCAACGCCTGTGAAATCGGGGTTCCAAGGCGTCAAACTCAGACAGCCACACGGTCCTCAGATTCCCGGTTGAGCTATGGCTAA 2388 0.4326 MASRNQNRPPRSPSHKKAGSEELFSDKRRRIGADKMERQGATGSRTRTPFSSVNNRTDAASDAGTAEPSECGTIEFTKEDVEALLNEKMKKGNPYDNKKKMEQMTDLIKKLKLCVRWFKKIEEGDSQEKQRLGSELEAAQKKCNDTEVEMKNMMEELNKRISDLEEKLAKEESDKLEANNLYREEKEARNAAEKVCKEKSAELERIQDEKSAAERKAISNEDLYKRSQEYNMSLQQYNRRLQSDLETANEANKRLETEKATIVESLSHVRGHNKVLQEQLVSLKVSQSEALHEKEISTKELKCLREELKQIRDDRDCQQKQVKDLIAEVAKYKEFTGESCAKLDSLTIKTNAIEETCSSQREQIFILEQQLKAEREKLKMADMSASETRTVFEEQKRIIRELQDKLADREFQIVEGEKLRKKLHNTILELKGNIRVFCRVRPLLPDDGTGTDMVVSYPTSTEALGRGIDLVQNGQKYPFTFDKVFNHDASQNDVFLEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPDAPDLKGLIPRSLEQIFQISQTLKDQGWKYKMQASILEIYNETIRDLLSNRSSAIDQTRSENGVPGKQYTIKHDANGNTHVSDLTIVDVCSVNEISSLLKQAAQCRSVGRTQMNEQSSRSHFVFTLRICGINENTEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEEHVPFRNSKLTYLLQPCLGGDSKTLMFVNIAPDQSSTNESLCSLRFAARVNACEIGVPRRQTQTATRSSDSRLSYG 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151108g00001 795 Gene3D Kinesin motor domain 374 774 IPR036961 -
Stsc151108g00001 795 Pfam Kinesin motor domain 439 770 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc151108g00001 795 MobiDBLite consensus disorder prediction 1 74 - -
Stsc151108g00001 795 MobiDBLite consensus disorder prediction 14 36 - -
Stsc151108g00001 795 Coils Coil 129 265 - -
Stsc151108g00001 795 CDD KISc_C_terminal 431 774 - -
Stsc151108g00001 795 FunFam Kinesin-like protein 379 774 - -
Stsc151108g00001 795 Coils Coil 294 328 - -
Stsc151108g00001 795 ProSitePatterns Kinesin motor domain signature. 672 683 IPR019821 GO:0003777|GO:0005524|GO:0007018
Stsc151108g00001 795 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 393 770 IPR027417 -
Stsc151108g00001 795 ProSiteProfiles Kinesin motor domain profile. 433 772 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc151108g00001 795 PANTHER KINESIN-LIKE PROTEIN KLP-3 283 780 IPR027640 GO:0003777|GO:0007018
Stsc151108g00001 795 PRINTS Kinesin heavy chain signature 508 529 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc151108g00001 795 PRINTS Kinesin heavy chain signature 642 659 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc151108g00001 795 PRINTS Kinesin heavy chain signature 673 691 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc151108g00001 795 PRINTS Kinesin heavy chain signature 722 743 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc151108g00001 795 SMART kinesin_4 431 780 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc151108g00001 795 MobiDBLite consensus disorder prediction 42 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151108g00001 Stsc-Chr151108 1645 6936 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151108g00001 342 769 Calmodulin-binding Proteins AT5G65930 37.443 1.80e-79 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151108g00001 K10405 - gmx:100818473 1179.08