Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151105g00004 ATGATTATCTCTTTTAGATCATATGCTTTTTTCAGTCTTATATGGTTTATGATGATTAGTCATGCCTATTCCAAAGATGATCAAAAGACTTACATTATTTACATGGGTGGTCATCCTAAGGGTATTGACCCAACTTCATTACCTTCTCTTCATACAGCCATGGCTCAAAAAATTCTCGGCAGTAATTTCAAATCAGAAGCTATACTCCATAGTTACAAAAAGAGCTTTAATGGATTTGTAATGAAGTTAACAGAAGAAGAGGCGGAAAGGATGGCAGAAATGGAAGATGTTGTGTCAGTTTTTCCAAACAAGAAAAATCTCCTTCACACAACAAGATCATGGGATTTTATAGGATTTCCCCAGCAAGTCAAAAGAACAAATATAGAAAGTGACATTATTGTTGGAGTATTAGACTCTGGAATATGGCCAGAGTCTCAGAGTTTTAGTGACAAAGGATTTGGTCTGCCACCCAACAAATGGAAGGGATCATGTCATAACTTCACTTGTGATAGGAAAATCATTGGCGCAAAATACTACAACGTTGAAGGTAGCTATGACAAAGATGACATTAGATCTGCTAGAGATTCAAATGGACATGGATCACACGTTTCATCAACAATTGCTGGGAATGTGGTTGAGTCTGCAAGCCTGTTTGGGTATGCATCAGGATCAGGGAGAGCGCGTGGAGGATTACCCTCGGCACGCATTGCCGTCTACAAGATCTGTTGGTCATCGACCGGCTGCAGTGATGCCGACATTCTTGCGGCATTTGATGACGCAATCCATGATGGCGTTGACTTCATCTCTATTTCAGTTGGGGCAAGTGACCCTTTTCCATTTGGATATTTTGAAGATGCAATTAACATTGGGAGTTTCCATGCAATGAAGAGAGGCATATTAACATCTAATTCTGCCAATAATATGGGTCCGGATTTTAGCTCTATGACTAATTATTCACCTTGGTTGCTCTCTGTGGCTGCTGCCACCATTGATAGAAAGTTTCTAACAAAGGTTCAATTGGGCAATGGCATCACTCTTGAGGGGGTTTCAATAAATACATTTGATCTCAAAAACAAAATGTTCCCTTTAATTTACGGTGGAGATGCACCAAATACTGCTGCTGGCTATAACAGATCCCTATCTAGGTATTGTTATAAGAACTCATTGAATAAACATTTGGTGAAAGGCAAGATCGTTTTGTGTGAGAGCATTCTTCTTCCAACTGTGATAGAGTTATTATCCGGAGCAGTTGGCATGATACATGGAGCCATCTCCCCAAAAGATTTACCAAATACATATGCTGTGCCTTCAACTTTCTTGACTCTAAGGAACTTTAAATTAGTATATTCTTACTTAGTTTCAATGAGAAATAATGCAACAGCTACAATATTCAAGAGTGAGGAAGTAAGAGACTCAATAGCCCCATATGTAGCTTCATTCTCATCAAGAGGTCCAAATCCAATCACACCAAACATTCTTAAGCCTGATCTGGCTGCTCCAGGAGTGAACATTTTAGCAGCATGGTCTCCAATTTCTCCAATTTCAGAAGTTAAAAGTGACAAAAGATTAGTCCACTATAACATTATTTCTGGCACTTCAATGGCATGCCCTCATGCCACTGCAGCAGCTGCATATATCAAATCATTTCATTCTAATTGGTCTCCTGCTATGATCAAGTCTGCACTCATGACCACCGCTATTCCAATGAGTGCAACACTTAATCCTGAGGCCGAATTTGCATATGGCGCGGGACTAATTAATCCTATTAAGGCAGCAAATCCCGGTTTAGTGTACGACATTGACGAAGCTGATTATGTCAAATTCTTGTGCCAAGAAGGCATTGAAACAGAAAAGCTTCGAATTCTGACTAAAGATCATAGCAGTTGCAAGAAAGTGGGTAAGACAGAAAGTGTATACGACCTGAATCTGCCATCAATTGCTCTCTACACGAACGTGTCATCATATTTCACACGAATTTTTCATAGAACAGTTACGAACGTTGGATCTGCAACATCAACATATAAAGTGAAAGTGATGTGTCCATCTCTTTTGGAAATTCAAGTGAAACCTGATACATTGTTGTTTGAATCTAAAGGCCAAAAGAAATCCTTCTCTGTCATTATAGAAGGGAGCATCAGTGTAGCTATAGCTTCTGGTTCGTTGATTTGGGATGATGGAACATTTCAAGTTAGAAGCCCCATTGTAGTGTTTACCCAATCTCCTGTTCCACCATTTATCTTCCTGTAA 2247 0.3947 MIISFRSYAFFSLIWFMMISHAYSKDDQKTYIIYMGGHPKGIDPTSLPSLHTAMAQKILGSNFKSEAILHSYKKSFNGFVMKLTEEEAERMAEMEDVVSVFPNKKNLLHTTRSWDFIGFPQQVKRTNIESDIIVGVLDSGIWPESQSFSDKGFGLPPNKWKGSCHNFTCDRKIIGAKYYNVEGSYDKDDIRSARDSNGHGSHVSSTIAGNVVESASLFGYASGSGRARGGLPSARIAVYKICWSSTGCSDADILAAFDDAIHDGVDFISISVGASDPFPFGYFEDAINIGSFHAMKRGILTSNSANNMGPDFSSMTNYSPWLLSVAAATIDRKFLTKVQLGNGITLEGVSINTFDLKNKMFPLIYGGDAPNTAAGYNRSLSRYCYKNSLNKHLVKGKIVLCESILLPTVIELLSGAVGMIHGAISPKDLPNTYAVPSTFLTLRNFKLVYSYLVSMRNNATATIFKSEEVRDSIAPYVASFSSRGPNPITPNILKPDLAAPGVNILAAWSPISPISEVKSDKRLVHYNIISGTSMACPHATAAAAYIKSFHSNWSPAMIKSALMTTAIPMSATLNPEAEFAYGAGLINPIKAANPGLVYDIDEADYVKFLCQEGIETEKLRILTKDHSSCKKVGKTESVYDLNLPSIALYTNVSSYFTRIFHRTVTNVGSATSTYKVKVMCPSLLEIQVKPDTLLFESKGQKKSFSVIIEGSISVAIASGSLIWDDGTFQVRSPIVVFTQSPVPPFIFL 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151105g00004 748 FunFam Subtilisin-like protease SBT1.5 131 342 - -
Stsc151105g00004 748 Pfam Peptidase inhibitor I9 30 105 IPR010259 -
Stsc151105g00004 748 ProSitePatterns Serine proteases, subtilase family, serine active site. 531 541 IPR023828 -
Stsc151105g00004 748 ProSitePatterns Serine proteases, subtilase family, histidine active site. 199 209 IPR022398 -
Stsc151105g00004 748 CDD Peptidases_S8_3 108 567 IPR034197 -
Stsc151105g00004 748 PRINTS Subtilisin serine protease family (S8) signature 129 148 IPR015500 -
Stsc151105g00004 748 PRINTS Subtilisin serine protease family (S8) signature 195 208 IPR015500 -
Stsc151105g00004 748 PRINTS Subtilisin serine protease family (S8) signature 530 546 IPR015500 -
Stsc151105g00004 748 ProSiteProfiles Serine proteases, subtilase domain profile. 113 592 - -
Stsc151105g00004 748 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 40 736 IPR045051 -
Stsc151105g00004 748 Gene3D - 609 738 - -
Stsc151105g00004 748 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 109 IPR037045 -
Stsc151105g00004 748 Pfam Subtilase family 130 584 IPR000209 GO:0006508|GO:0008236
Stsc151105g00004 748 CDD PA_subtilisin_like 338 463 - -
Stsc151105g00004 748 Gene3D - 331 470 - -
Stsc151105g00004 748 Gene3D Peptidase S8/S53 domain 131 605 IPR036852 GO:0004252|GO:0006508
Stsc151105g00004 748 SUPERFAMILY Subtilisin-like 108 596 IPR036852 GO:0004252|GO:0006508
Stsc151105g00004 748 Pfam Fibronectin type-III domain 640 736 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151105g00004 Stsc-Chr151105 8130 16213 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151105g00004 7 737 Subtilisin-like Serine Gene Family AT3G46850 46.205 0.0 617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151105g00004 - - gmx:100787973 1042.72