Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151104g00031 ATGTGTAAGGAAACAGGACCATTTGTTGACAGTGAATTTGAAGAATTTATGAAAAGTTATGGATCTTTGATGTTAAGGAGATATAATTATTCTGATGTGAAAAGAATGACAAATTCATTTCATAATAAATTAGGAAAGGGGGGATATGGAATTGTATACAAAGCATGCTTAAGTGATGGTTGTCCTGTGGCAGTGAAGGTGTTAACTGAATCCAGCGGAAGTGGGGAGGAATTCATAAATGAAGTAGCTAGTATCAGCAAAACTTCTCATGTCAACATTGTCTCACTTTTGGGATTTTGTTACGAGAAGCATAAAAGGGCACTCATCTATGAATTTATGCCGAATGGTTCGTTGGACAAGTTCATCTACAAGCAAGAATCTCCCAATAATGCTTTTTGTAGTTTGGATTGGAATACATTGTTTCAAATTACAATTGGTATTGCACGAGGATTGGAATATTTGCATCGAGGGTGTAGTACAAGAATCTTGCATCTTGATATTAAGCCTCAAAATATTCTTTTAGATGAAGATTTTTGTCCAAAAATTGCTGATTTCGGATTGGCAAAAATATGTAAGAAGAAGGAGAGTATTGTATCGTTTCTAGGTACAAGAGGAACTCCTGGATACATTGCACCAGAAGTATTCAGTCGAACCTTCGGTAAAGTTTCTCACAAGTCTGACGTGTACAGTTTTGGTATGTTGATTCTTGAATTGGTGGGAGGCAAAAAGAACTACGACACCGGTGAATCACTTACTGGTGAGATGTATTTTCCAGATTGGATTTACAAGGATCTGGAGGAGCAGAATATGCTTGGTCGGGGTTTGGCCACTACTGAGGAAGAAAATGATATGATAAAGAAAATAACTTTGGTGAGCTTATGGTGCATTCAAACAAGTCCATCAGATAGACCACCAATAAATAAAGTAGTGGAGATGTTAGAAGGGCCACTTGAATCGGTGCCATATCCTCCAAAGCCTGTGTTATATGCTCCTCAAATGTCTGTCTCACAGTTTTCACGAATCTCCTATAGCATTACAGATGAGGAGGATTCTGATGAAATTGTTGAGGAGACTGTTTCCATCAAATAA 1089 0.3756 MCKETGPFVDSEFEEFMKSYGSLMLRRYNYSDVKRMTNSFHNKLGKGGYGIVYKACLSDGCPVAVKVLTESSGSGEEFINEVASISKTSHVNIVSLLGFCYEKHKRALIYEFMPNGSLDKFIYKQESPNNAFCSLDWNTLFQITIGIARGLEYLHRGCSTRILHLDIKPQNILLDEDFCPKIADFGLAKICKKKESIVSFLGTRGTPGYIAPEVFSRTFGKVSHKSDVYSFGMLILELVGGKKNYDTGESLTGEMYFPDWIYKDLEEQNMLGRGLATTEEENDMIKKITLVSLWCIQTSPSDRPPINKVVEMLEGPLESVPYPPKPVLYAPQMSVSQFSRISYSITDEEDSDEIVEETVSIK 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151104g00031 362 FunFam PR5-like receptor kinase 113 323 - -
Stsc151104g00031 362 SUPERFAMILY Protein kinase-like (PK-like) 17 313 IPR011009 -
Stsc151104g00031 362 Gene3D Transferase(Phosphotransferase) domain 1 113 320 - -
Stsc151104g00031 362 CDD STKc_IRAK 44 315 - -
Stsc151104g00031 362 Pfam Protein kinase domain 41 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151104g00031 362 Gene3D Phosphorylase Kinase; domain 1 11 112 - -
Stsc151104g00031 362 PANTHER RUST RESISTANCE KINASE LR10-RELATED 13 334 IPR045874 GO:0004672
Stsc151104g00031 362 SMART serkin_6 38 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151104g00031 362 ProSitePatterns Protein kinases ATP-binding region signature. 44 66 IPR017441 GO:0005524
Stsc151104g00031 362 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Stsc151104g00031 362 ProSiteProfiles Protein kinase domain profile. 38 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc151104g00031 362 FunFam serine/threonine-protein kinase PBS1-like 9 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151104g00031 Stsc-Chr151104 130924 132412 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151104g00031 24 335 Receptor kinase-like Gene Family AT5G38280 60.759 4.38e-134 396
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Stsc151104g00031 Pkinase 5.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151104g00031 - - aip:107635702 649.047