Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151104g00020 ATGAGTGATTCTACGGTGAAGAATTCTTCTTCATGTTTGGCCATTGTGGAGAAGAAGGCACAGAAGCCAGGTGGCTGTTCTGGCATTTTCTTTCAGCTCTTTGAATGGAAGAGGAAGCTTGCAAAGAAGAAGCTCTTCTCTAAGAAGCTTCTGCCTCCTGCTCGTGCTAAAAGGTTTAAGGGAGATGAAAAAATGCCAAATTCCAAGATCCACTTGATTGCTAATGAGAATAGTGGAGGTTTCCCAAGTGCCAAGAAAGGTGGGAATTATGGCTTTGAGGTGGTAGTAGCACAAAAGAGCGAAATGCGAGCTCCTAGTCTGGTTGCTAGATTGATGGGGCTAGAAACTATTCCGGCTTCAAAGCGTGATAAGTCCAAGAAATCTTTACATTTGGATGGTTTTGGTGATGAGGTGAAGGAGTGTAAGAGTAATTGTGAGTTGGATAGGCAATGTGTGGATTCAGAAATAGTAGTTATGAAGCATGATTCAAGGCCTGAGAAGCTTCAGAAGACCGGGACAGATGAGAGACGGGCAGTGACAAGGTTTGGTGCTGAAGCCTTGCAAATTAAGAACGTTTTGTCTAGAGCAAGGAAGTATCACCATCACAATCACCATCCAAAGCTTGGGTCTCAGTTGAAGAGCCCGAGAATTCCTTCGGCAAAGAGTGCTTCTCGAAGCTCTAGGTTGATAGGAGCAGCTACTAGAATTTTGGATCCTGGATTACAGGCTAGAAGCAGAGATAAAGGTTCTCTTCTCACATATCATCCTAAAACCAGCATTGTGACGAATTGTGAGGGACCTATTTCGGCCGATACACAAAATCAATTTGATTATGATGGCAGCACAGCCAAGCCTTTGATGGGGCAGACTTCTTGCAAAAATTGTGGTAATTTAGTTGATGTTGTGGACTGCAAGCTGGATGCTCCTTTACCTGTTGTGTCAGATGTGTGTGCAACAACCTCGGTATCAGCACAGAAGAATGGAAGGTCCTTTACTCCCTCTCATGAACAAGAAAGAGAAATAGTTCTTCTAAGAAGTCAAGAAAAGCCCATGTCTCTTGCTACTGAGAAAGAAGGAAGAGATAATGTGCAGCAATTTTGTAACAAACACATCACCAAGAGAATGACAGTGCCTCTCGACGGTCCAGATATATGGAAGCCGTCAAGCCAATCGATTAGTACTCGAGAGGGTGATGCGTCTTCCTTTGCATTAAAGCACAAAACTCAAACACAAGAGCGAATGTTGAGCAGCGAAAGAGGTTCATTTGCATCTACAATGAGTAATACAGGAGTGAAAAGAGTGTCATCATCTACAAGCAATGTGAATGAGACTAAAGACTTTGTTGCTCTGAATAGAAGCCTAGGTGGTCAAGTGAGGACAAGGTCACCCACCAAAGTAGATAGCTCGAAATTTGACCTTGAGAAAAAACCTAGTTTTAGTCAGAACAAAGCCTTGTCTGATGTAAGGACATTAGAGAGAAAAAGAAGAACCTCAAATGTCATGCAAGGTAAAAGTACAGCTCCTTGTTCAGCTGGAGTGAGTCAGAGAAATCTTCGATCCGATGCACTCGGCGGGAAACAGAAGGGTTTTGTTGGGTCCTGGAATAGTTCTAACATCAAAAGTAAGCAATGCAGTAAGGAGAAAACAGTGAAGGTTAATGACAACAAAACCAACAAGGTGGTTTCGTTTACATTTAATTCCCCATTGAAGCAAAAGATAGGGATAGATGCTGAGAAGGAAGAGATAAGAACCGATATCGAGAGGAAGACATGCTTCCAAAGACCTTCACCCTTGCGAGTTGATGGTTTAGGTGCCTTTCTAGAACATAAGTTGAAAGAGTTAACTTCTCAAGAAGATTATGAGTTGGCTACAGGTACTCCATCAAAGAAATCAACTGCAATGATTCTTCAGGAGCTGATATCTGCTCTAAGTTCGGAGCGCCTGATTTGCTGTAATGGTCATCTGTTTGATGAAAACATTGAGTTTCATAAAGAGCCAAGACACGAAAGGATATTCGGAGCCTCTTGCAATGGTAATCATCACAGTCCTGGATCAGTTCTTGAAGCTTCCTTTTCTTCTAGTAGTTTGGATGAAAGCTCAGTTTCAGGGCACGGTTTTCGCCCTTACTCCTTGAGTAACTCTTATGATCAGCTGGAACAATTGGAACAAGATACTGAGCTCACAGATTCTGCAACCACATCCTTAGACAAAGGGAGAGTAGTTTGTGAGATACTGATTGATCATGTCAACCAAATTCCCGGGCCATTACAAAGCTTATATTCTTTTGGGCCAAGTTTGACAAGAAGCAAGCTCACTCATATGAAGGATGTTATCTTGAATGCTGAATTGGTTATCGGAATTGACACTGCGTTTGGTCGGGATGAAGCCCTGGAACTTGTAATTCATCGGTTTCTCCTCGACGAACTGGACACCATGGCAAGTGATAGTATTTGGAGAAATTTTAATCTCTTTGTGGGGTGCGCTGAGTCTAGACATCCAAACAAACTTCAGGCATTCCTCTTTGATTGTGTCATAGACTATCTAGAATCAAATTGCTGCCCTTATCTTGAGTGTGGATTCAAGCTATGGTGGACCAAGTTGCATCAATGCTTGAAGGCCAAGGTGCTGGCTCAGGAGGTAAAGTCCGAGATCAAGAGATGGTCGAGCATGGCCGGGATGGAACATGATGAAATAATAGAATGGGAAATGAGCCATTCTCTGGGGAAATGGATGGACTTTGATATTGAAACATTTGAGGCTGGTGCTATGATAGATAAGTGCATATTTCAAAGCTTGTTGGATGAAATTGTTCAAGACCTTGTAGGTTGCAAACATCAGCATGGTTCTTCATCATGCAATATCTCCCTCTATCACTAA 2877 0.4251 MSDSTVKNSSSCLAIVEKKAQKPGGCSGIFFQLFEWKRKLAKKKLFSKKLLPPARAKRFKGDEKMPNSKIHLIANENSGGFPSAKKGGNYGFEVVVAQKSEMRAPSLVARLMGLETIPASKRDKSKKSLHLDGFGDEVKECKSNCELDRQCVDSEIVVMKHDSRPEKLQKTGTDERRAVTRFGAEALQIKNVLSRARKYHHHNHHPKLGSQLKSPRIPSAKSASRSSRLIGAATRILDPGLQARSRDKGSLLTYHPKTSIVTNCEGPISADTQNQFDYDGSTAKPLMGQTSCKNCGNLVDVVDCKLDAPLPVVSDVCATTSVSAQKNGRSFTPSHEQEREIVLLRSQEKPMSLATEKEGRDNVQQFCNKHITKRMTVPLDGPDIWKPSSQSISTREGDASSFALKHKTQTQERMLSSERGSFASTMSNTGVKRVSSSTSNVNETKDFVALNRSLGGQVRTRSPTKVDSSKFDLEKKPSFSQNKALSDVRTLERKRRTSNVMQGKSTAPCSAGVSQRNLRSDALGGKQKGFVGSWNSSNIKSKQCSKEKTVKVNDNKTNKVVSFTFNSPLKQKIGIDAEKEEIRTDIERKTCFQRPSPLRVDGLGAFLEHKLKELTSQEDYELATGTPSKKSTAMILQELISALSSERLICCNGHLFDENIEFHKEPRHERIFGASCNGNHHSPGSVLEASFSSSSLDESSVSGHGFRPYSLSNSYDQLEQLEQDTELTDSATTSLDKGRVVCEILIDHVNQIPGPLQSLYSFGPSLTRSKLTHMKDVILNAELVIGIDTAFGRDEALELVIHRFLLDELDTMASDSIWRNFNLFVGCAESRHPNKLQAFLFDCVIDYLESNCCPYLECGFKLWWTKLHQCLKAKVLAQEVKSEIKRWSSMAGMEHDEIIEWEMSHSLGKWMDFDIETFEAGAMIDKCIFQSLLDEIVQDLVGCKHQHGSSSCNISLYH 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151104g00020 958 MobiDBLite consensus disorder prediction 494 513 - -
Stsc151104g00020 958 Pfam Domain of unknown function (DUF4378) 772 935 IPR025486 -
Stsc151104g00020 958 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 13 939 - -
Stsc151104g00020 958 MobiDBLite consensus disorder prediction 378 399 - -
Stsc151104g00020 958 MobiDBLite consensus disorder prediction 199 225 - -
Stsc151104g00020 958 Pfam DUF761-associated sequence motif 98 123 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151104g00020 Stsc-Chr151104 82959 86498 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151104g00020 1 940 TRM (TON1 Recruiting Motif) Superfamily AT1G67040 30.926 8.13e-85 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151104g00020 - - aprc:113861902 1085.48