Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151104g00011 ATGTACACCTCAAGGAAGAAAATCCACAAGGATAAGGATGCTGAACCCACTGAATTTGAGGAGACAGTTGCACAGTACTTGTTTGATTTGGAGAACACTAATCAGGACTTGAAAAGTGATTTGAAAGATCTCTACATGAACCAGGCAATTCAAATGGATGTGGCTGGGAATCGCAAGGCTGTGGTCATCTATGTTCCCTTCAGATTGAGGAAGTCGTTCCGCAAAGTTCATCTTCGGCTTGTCAGGGAGCTTGAGAAGAAGTTTAGTGGGAAGGATGTTGTGTTGATCGCCACAAGGAGGATTGTGCGGCCTCCAAAGAAAGGGTCTGCTGTTCAACGGCCACGAACCCGCACTTTGACTGCTGTGCATGATGCTATTCTTGAGGACGTTGTGTATCCTGCCGAGATTGTTGGCAAACGAGTCAGATACAGACTTGACGGATCAAAAATAATCAAAGTTTTCTTGGATCCGAAGGAACGTAACAACACTGAATACAAGCTGGAGACTTTCTCTGGAGTATATAGGAAGCTTACTGGAAAAGATGTAACTTTTGAGTTTCCCAATACAGAAGCCTAG 576 0.4427 MYTSRKKIHKDKDAEPTEFEETVAQYLFDLENTNQDLKSDLKDLYMNQAIQMDVAGNRKAVVIYVPFRLRKSFRKVHLRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRTRTLTAVHDAILEDVVYPAEIVGKRVRYRLDGSKIIKVFLDPKERNNTEYKLETFSGVYRKLTGKDVTFEFPNTEA 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151104g00011 191 PANTHER 40S RIBOSOMAL PROTEIN S7 1 190 IPR000554 GO:0003735|GO:0005840|GO:0006412
Stsc151104g00011 191 Pfam Ribosomal protein S7e 7 186 IPR000554 GO:0003735|GO:0005840|GO:0006412
Stsc151104g00011 191 Coils Coil 27 47 - -
Stsc151104g00011 191 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151104g00011 Stsc-Chr151104 31165 32870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151104g00011 1 191 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 79.058 3.49e-114 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151104g00011 K02993 - gmx:100500684 362.459