Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151104g00001 ATGCGGATGAGCTGTAATGGATGCAGGGTGCTGCGAAAGGGATGCAGCGAGAATTGCAGCATAAGGCCATGCCTACAATGGATAAAGAGCCCAGAGTCACAAGCCAATGCCACCGTCTTCCTCGCCAAGTTCTACGGCCGCGCCGGCCTCATGAACCTCGTCAACGCTGGCCCCGAACACCTTCGTCCAGCCATTTTTCGATCCTTGCTCTACGAGGCATGCGGCAGGATAGTCAACCCAATCTACGGCTCCGTCGGCCTATTGTGGTCTGGCAGCTGGCAACTCTGCCAGGCGGCCGTCGAAGCTGTCTTGAAAGGCGCCCCCATCACTCCCATCACCTCCGAAGCGGCCGCCAACGGCCGGGGTCCACCTCTTAAGGCCTATGACATACGCCACGTCACCAAAGACGACTCTATCTCCGCCGCCTCTACTCATCAGAACCCCAACCACAGGCTCAAGACTCGATCCCGCAAGCGATCACACTCACAGTCACAGCCCAAACCGAAAGCGGACAAGCTAACAACCATCACCACCACCACTAACAACAAGAACCACGTTGAGGAGGTCGTGAACAATTCGGCGAGTCAGGATCACGAGTCGTCCCTGAGTCACCAGTCCGAGTTGGCCAACGTGGCGGAGGGAGGAGGAGACAGCAAAGAGAGGGAGAGGGAGAGCGAGAGCATCGTGTCTGTCGAGAATAACACCGCGGAGGCTGCTTCGGTTCTTTTCCGTGACGACCCGGAGTCTAACCGGAAGCGCGTTGAGCGAACCGATGAGGACCGAAGCGGACTTGGTCTAGACCTTACGCTTGGGTTCGAACCGGTTTCTTCGTCGTCACGTGCGGATCACGTGGTTCCTGTTAAGAAGAGGAGGTTGGAGTTGAAGGATTATGGTGTGGGGCTTGGACTAGAATGCTCGGCTTGA 924 0.5714 MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLVNAGPEHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPITSEAAANGRGPPLKAYDIRHVTKDDSISAASTHQNPNHRLKTRSRKRSHSQSQPKPKADKLTTITTTTNNKNHVEEVVNNSASQDHESSLSHQSELANVAEGGGDSKERERESESIVSVENNTAEAASVLFRDDPESNRKRVERTDEDRSGLGLDLTLGFEPVSSSSRADHVVPVKKRRLELKDYGVGLGLECSA 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151104g00001 307 MobiDBLite consensus disorder prediction 214 228 - -
Stsc151104g00001 307 MobiDBLite consensus disorder prediction 167 208 - -
Stsc151104g00001 307 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
Stsc151104g00001 307 MobiDBLite consensus disorder prediction 139 261 - -
Stsc151104g00001 307 PIRSF AS2 1 297 IPR017414 -
Stsc151104g00001 307 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 3 220 - -
Stsc151104g00001 307 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Stsc151104g00001 307 MobiDBLite consensus disorder prediction 244 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151104g00001 Stsc-Chr151104 349 1946 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151104g00001 1 292 AS2 family AT3G02550 56.849 1.67e-103 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Stsc151104g00001 LOB 1.6e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151104g00001 - - lja:Lj1g3v3317390.1 389.037