Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151102g00025 ATGGAGGAATCAAGAGAAATAGATCCAAGAAGCGGCTTCTGCGCCTCAAACTCAGTCTTCTACAGCAAAAGGAAGCCACTGCCACTCCCACACAACCACTCCTTGGACGTCACCACCTTCATCTCATCACAAGCCCACCATGGCAGGATCGCCTTCATCGACGCCGCCACCGGCAACCACTTCACCTTCCACCAACTCTGGCGATCCGTCGACTCCGTTGCCTCCTCCCTCTCCGACCTCGGCATCCGCAAGGGCAACGTCGTCCTCCTCCTCTCCCCAAACAGCATCTACTTCCCCGTGGTCTGCCTCGCCGTCATGTCCCTCGGCGCCATCATCACCACCA 343 0.5831 MEESREIDPRSGFCASNSVFYSKRKPLPLPHNHSLDVTTFISSQAHHGRIAFIDAATGNHFTFHQLWRSVDSVASSLSDLGIRKGNVVLLLSPNSIYFPVVCLAVMSLGAIITT 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151102g00025 114 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 13 114 - -
Stsc151102g00025 114 Pfam AMP-binding enzyme 43 113 IPR000873 -
Stsc151102g00025 114 Gene3D - 14 114 IPR042099 -
Stsc151102g00025 114 SUPERFAMILY Acetyl-CoA synthetase-like 40 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151102g00025 Stsc-Chr151102 144821 145196 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151102g00025 7 114 Monolignol Biosynthesis Gene Families AT1G20510 76.852 4.77e-55 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151102g00025 K10526 - qsa:O6P43_016337 176.022