Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151102g00020 ATGGCTTCTTCTTGGAGTCCAAATCATGAGAAGATGCACAAGAACTTGAGCATACAGTTAGCTGTGGCAGTAAGAAGTGTTCAATGGAGTTATGGAATATTCTGGGCACCTTCAACAACCCAAGAAGGAGTGCTGGAATGGAGGGAAGGCTACTACAATGGAGACATCAAGACAAGGAAGACAGTGCAGACAACAATGGAAATTAAGAATGACAAAATTGGGGTTCAGAGGAGTGAGCAACTGAAGGAACTGTACAAGTTCCTTCTTGTTGGTGAATCTGATCCACAAACAAAAAGGCCTTCAGCTGCATTGTCTCCTGAGGATCTTTCAGATTCTGAGTGGTATTATTTGGTTTGCATGTCCTTTGTGTTCTACCCTAATCAAAGTTTGCCTGGTAGAGCACTAGAAATTGGTGAAACAATATGGTTATGCAATGCTCAACATGCAGATAGTAAAGTTTTCTCTCGTTCTTTACTTGCCAAGAGTGCATCAATTCAGACTGTGGTGTGCTTCCCCTATCTAGGGGGTGTTATCGAGATTGGTACAACTGAACTGGTGCCAGAGGACCCTAATCTTATTCAACATGTGAAGGCTTGTCTCTTGGAATTCTCAAAGCCTATTTGCTCTGATAAATCTTCATCAGCACTCAATAAACCGGATGATGACAAACTTCAACCATGCTCCAATGGTGAACATGTTTTAGTGGACACAAAGGTTTTGGAGTACTCATGTTCACCAGCTGAAGAAATCAAGGTTGATCAAGATCCTATCAAGGAACTACAAGAAGATTCCAACATGGATTCTCCTGATGGATGTTCTAATGGTTGCAAGCACAATTTCCATGTTGGGGAATCGATGGTTGAGGGAATCCATGATGGAGGGTCTTCTTCTCCAGTTCATTTCATGGATGACGATGATGCCTTGAGCAATGGTGCACCTGATTCCCTGAGTTCTTGTGATTGTATATCCGAGGCATCTGAGAACCGAGGCAAGGCTTCAAAGGATGTTCAACTAATAAGGGGAATTCGAAGCTTCAATCATTTGAATAGAAGTTCATTGGATGCAGCAGCAACTGATGAACACTTGAGCTACGCAAGAATACTCTGTGCTATTCTTGGAAACTCGTCTACTTTCAAGCAGAATCCACATGCTAGTAACTCAAATTGCAAATCGAGTTTCGTGAAATGGAAGAAAGGAGGAATCTGTGGGCAGAATCGGCAGCGGTTGGACCAAAGCTTGTTGAAGAAGACTCTGTTTACTGTCCCTCTTACGCATAGGAGCTCCTCATCTATCAAATCAATGAAAGAAAATGAGACAAAAGAATGGACTAATAGATTGGAAAATGCTGATGACAAGTTCATGGAAAATGTGTTATCTGATAAAATAAGAGAAACTGGAAACTATAAGGATCTCAAGTCTTCAATTCCTCATCCTATAAGTGAGGTGGAGAAGATTTCGATCCTAGGCGACACGATTAAGTACTTGAAAGAGCTTGAGACAAGAGTGGAAGAACTAGAATCTTACATGGACATGGCAGATTCGGAAGCAAGAATGAAAAGAAAATGTCCAGATGTGATAGAGCAGATATCAGATAACTATGGAGCCAGAAAGGTTTACAATAAGGGAATGAAGAAGCCTTGGATGATGAACAAGAGAAAGGCTTGTGACATTGATGAAACAGAGAGATTTGTTGTGTCTGAAGAAGATAATAATAAGCCATTGGATGTGAAGATTAAGATGAAGGAGCAAGAGGTTTTGATTGAGATGAAATGTGCTTATAGAGAATATATATTGCATGATATCATGGATGCTATTAACAATCTGCATTTGGATGCTCACACAGTTGAGTCATCAACAACTGAAGGTCTTCTTACATTGACACTTAAATCCAAGTTTCGAGGGACCGCGACTGCCCCGCCGCGGATGATCAAAGAAGCACTCTGGAAAGTGTGTGGAAGTATTTGA 1965 0.4107 MASSWSPNHEKMHKNLSIQLAVAVRSVQWSYGIFWAPSTTQEGVLEWREGYYNGDIKTRKTVQTTMEIKNDKIGVQRSEQLKELYKFLLVGESDPQTKRPSAALSPEDLSDSEWYYLVCMSFVFYPNQSLPGRALEIGETIWLCNAQHADSKVFSRSLLAKSASIQTVVCFPYLGGVIEIGTTELVPEDPNLIQHVKACLLEFSKPICSDKSSSALNKPDDDKLQPCSNGEHVLVDTKVLEYSCSPAEEIKVDQDPIKELQEDSNMDSPDGCSNGCKHNFHVGESMVEGIHDGGSSSPVHFMDDDDALSNGAPDSLSSCDCISEASENRGKASKDVQLIRGIRSFNHLNRSSLDAAATDEHLSYARILCAILGNSSTFKQNPHASNSNCKSSFVKWKKGGICGQNRQRLDQSLLKKTLFTVPLTHRSSSSIKSMKENETKEWTNRLENADDKFMENVLSDKIRETGNYKDLKSSIPHPISEVEKISILGDTIKYLKELETRVEELESYMDMADSEARMKRKCPDVIEQISDNYGARKVYNKGMKKPWMMNKRKACDIDETERFVVSEEDNNKPLDVKIKMKEQEVLIEMKCAYREYILHDIMDAINNLHLDAHTVESSTTEGLLTLTLKSKFRGTATAPPRMIKEALWKVCGSI 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151102g00020 654 Coils Coil 432 452 - -
Stsc151102g00020 654 Gene3D - 459 529 IPR036638 GO:0046983
Stsc151102g00020 654 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 468 513 IPR036638 GO:0046983
Stsc151102g00020 654 Coils Coil 495 515 - -
Stsc151102g00020 654 PANTHER TRANSCRIPTION FACTOR TT8 12 651 - -
Stsc151102g00020 654 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 19 199 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151102g00020 Stsc-Chr151102 107532 111480 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151102g00020 15 651 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G63650 39.242 3.08e-128 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151102g00020 - - adu:107472380 1206.05