Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151101g00016 ATGTTCCCAATCTATTCTGAAAGATCTCAACAAGACATGTCCGCTATGGTTTCTGTCCTCACACAAGTCATTGGAGGAGGAAGCACTTCAAATGACCCTTTAACCCCTTCTTCTCATCAACCCAATAATACTACTACTAATCAGCAATCTCAATTATCCCAACAAGATCAAGGAAACACAAGAAGAAGACATTATAGAGGAGTGAGGCAAAGGCCATGGGGAAAATGGGCGGCAGAGATTCGAGATCCACAAAAGGCGGCAAGGGTTTGGCTTGGAACCTTTGAAACCGCTGAGGCGGCCGCACTCGCATACGACGAGGCAGCTCTAAGATTCAAAGGAAGCAAAGCAAAACTCAATTTTCCCGAAAGAGTTCAAGGAACCGGCGAATTCGGTAATTATCTTACAAATTTTCACCATAATAATAGTCGTCATCAATTTTATCCTCAAAATACAACAACTCAACAAAGTTTTCAGTATCCATCGCAAGGAATGATGGAAAGTGGTGGAGGATTTCGTTATGATCAACAGAACATGTATTTTGTTCCTCCATCTCATCATCAACACTATTCGTCGTCGTCGTCTTCGTCTTTAGAACTATCTCATGAACATTATAACCAACAACAAGAACTTATGAGATCATATTCTATACAATATGGTGGTTCTTCTTCTAATATTGATCATCATGATTATCAACAACAACAATATCCTACTAAGAATTGGATGAATAATAATGATGATGATGACATGGATGGTAGACAATAA 762 0.3924 MFPIYSERSQQDMSAMVSVLTQVIGGGSTSNDPLTPSSHQPNNTTTNQQSQLSQQDQGNTRRRHYRGVRQRPWGKWAAEIRDPQKAARVWLGTFETAEAAALAYDEAALRFKGSKAKLNFPERVQGTGEFGNYLTNFHHNNSRHQFYPQNTTTQQSFQYPSQGMMESGGGFRYDQQNMYFVPPSHHQHYSSSSSSSLELSHEHYNQQQELMRSYSIQYGGSSSNIDHHDYQQQQYPTKNWMNNNDDDDMDGRQ 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151101g00016 253 MobiDBLite consensus disorder prediction 222 253 - -
Stsc151101g00016 253 FunFam Ethylene-responsive transcription factor 2 63 122 - -
Stsc151101g00016 253 PRINTS Ethylene responsive element binding protein signature 87 103 IPR001471 GO:0003700|GO:0006355
Stsc151101g00016 253 PRINTS Ethylene responsive element binding protein signature 65 76 IPR001471 GO:0003700|GO:0006355
Stsc151101g00016 253 MobiDBLite consensus disorder prediction 182 204 - -
Stsc151101g00016 253 PANTHER DNA-BINDING DOMAIN 37 203 IPR044808 GO:0003700|GO:0009873
Stsc151101g00016 253 MobiDBLite consensus disorder prediction 24 58 - -
Stsc151101g00016 253 Pfam AP2 domain 64 113 IPR001471 GO:0003700|GO:0006355
Stsc151101g00016 253 ProSiteProfiles AP2/ERF domain profile. 64 121 IPR001471 GO:0003700|GO:0006355
Stsc151101g00016 253 SUPERFAMILY DNA-binding domain 64 122 IPR016177 GO:0003677
Stsc151101g00016 253 CDD AP2 64 122 IPR001471 GO:0003700|GO:0006355
Stsc151101g00016 253 SMART rav1_2 64 127 IPR001471 GO:0003700|GO:0006355
Stsc151101g00016 253 MobiDBLite consensus disorder prediction 222 242 - -
Stsc151101g00016 253 MobiDBLite consensus disorder prediction 24 70 - -
Stsc151101g00016 253 Gene3D AP2/ERF domain 63 123 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151101g00016 Stsc-Chr151101 115714 117654 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151101g00016 1 125 AP2-EREBP Transcription Factor Family AT5G61890 69.697 7.64e-58 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Stsc151101g00016 AP2 2.1e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151101g00016 - - ahf:112773083 343.969