Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151101g00009 ATGGGGTGGTTGAGCTCTTACTCCGGTGCAGTCGCACTACCTCTTCCTCCTTCCTTGTACGCCACACATTCACAAAGTGTTTTCTTGCAACAATTCCGAAACCCTGTCTTCAAATGCCACACCTTTTCAACTCTCTCTCTTACTCTTACCACCCATCGTAAGCTACTGTTTGTGGCTCCAGCTGCACCTCCCTCCCACGCGCAATGCGGTTCTTCAAGGGATGATTCTGATTTCGTGGTTGTCAATTTCTACCATTTTGTGTTCATCAAAGATCCACAAGCACTAGTCACCAAACACCTTTCCTTCTTGGAGGGTCTCAATCTTGACATCAATGGAAGAGTTTATTTGAATGAACAAGGGATTAATGCTCAGTTTAGTGGGCCATCAAAAGATGCACTGAAATATGTCAACTGGTTGAGAGAGGATAAGAGGTTTTCAGATATCCTGGTTCAGATATCTCCATCACAAAATGGTCATGCCTTTCCAAAATTGAAGTTGCGGTATAAGCCCTCATTAGTACAGGTTGAAGGTGGTATATCACATCTTCCTTTGCTTGATCCTTCAATGCGGGCAATACCTTTAGAACCTTCAGAATGGAGAAATAGGTTGGAACCTACCGATAAAAATGATCTTACACCAAAAGAATATCCTAAGAGGAATTACATTCTATTGGATGTAAGAAATGGTTATGAGTGGGATATTGGACATTTTGATGGGGCTCAACGACCTAACGTAGACTGCTTTAGGAGTACTTCATTTGGTATGTCTCAGCAAGAGATATCTGCATCAGATCCTTTATCAAATGTAGATAAAGAAAACACAAACATATTGATGTATTGCACTGGAGGGATTCGCTGTGATGTATATTCTACAATACTAAGGCAGCAAGGATTTCAGAATTTGTATACCTTGAAAGGAGGTGTCTCTCACTATTTAAAGAATGAAGGTCCTGCAAAATGGGTAGGAAATTTATTTGTATTTGACTCCCGTCTCTCTCTCCCTCCGTCTGTGTACTATCCCCAGGCCACAACTGAAGCAGACACGATGTCCCCAATTTCTGGAGTTGATAAGTTTGCAAAATGCTACGTATGTAGTTCGGAAGTCAGTGAATTGAGACACAGGAATTGTGCAAATCTTGACTGTAATTTGCTATTTTTATGTTGCAGTCAATGTGTAAACGACCTAAGAGGATGTTGTTGTTTGAGTTGCACTACTGCCTCGCGGCTTAGACCTGTTCTAATTGGAGAATCCAGATACAAAAAGTGGCACATCTACCGTGACATGGATTTGCAATGCAAAACATGA 1305 0.4138 MGWLSSYSGAVALPLPPSLYATHSQSVFLQQFRNPVFKCHTFSTLSLTLTTHRKLLFVAPAAPPSHAQCGSSRDDSDFVVVNFYHFVFIKDPQALVTKHLSFLEGLNLDINGRVYLNEQGINAQFSGPSKDALKYVNWLREDKRFSDILVQISPSQNGHAFPKLKLRYKPSLVQVEGGISHLPLLDPSMRAIPLEPSEWRNRLEPTDKNDLTPKEYPKRNYILLDVRNGYEWDIGHFDGAQRPNVDCFRSTSFGMSQQEISASDPLSNVDKENTNILMYCTGGIRCDVYSTILRQQGFQNLYTLKGGVSHYLKNEGPAKWVGNLFVFDSRLSLPPSVYYPQATTEADTMSPISGVDKFAKCYVCSSEVSELRHRNCANLDCNLLFLCCSQCVNDLRGCCCLSCTTASRLRPVLIGESRYKKWHIYRDMDLQCKT 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151101g00009 434 Gene3D - 65 173 - -
Stsc151101g00009 434 ProSiteProfiles Rhodanese domain profile. 217 320 IPR001763 -
Stsc151101g00009 434 Pfam Rhodanase C-terminal 322 404 IPR022111 -
Stsc151101g00009 434 Pfam UPF0176 acylphosphatase like domain 79 170 IPR040503 -
Stsc151101g00009 434 CDD RHOD_YceA 194 313 - -
Stsc151101g00009 434 Pfam Rhodanese-like domain 218 312 IPR001763 -
Stsc151101g00009 434 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 71 418 IPR020936 -
Stsc151101g00009 434 SMART rhod_4 203 317 IPR001763 -
Stsc151101g00009 434 Gene3D - 187 346 IPR036873 -
Stsc151101g00009 434 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 218 334 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151101g00009 Stsc-Chr151101 44690 48846 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151101g00009 74 431 Sulfurtransferasese or Rhodanese AT1G17850 66.757 0.0 512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151101g00009 - - gmx:100814358 647.506