Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151100g00027 ATGAGTAGTATTCCATATCCGTGCGACGATTCTTCTTCTTCTTCTTCTGTGCCAACAAGTTTCTTAGGGCTTCTCCTTCTTCACTACTCAAGAAGCAGATGCAACAGTGACAGCCATGGTCACAGTTCCTCTGAGCTTCTCAGGGACTTCGCCAACAGAGAGCTCAACGCCTTCCTCTGGCTCTCGCTGTTCCTCGTCACCGCCCTCCTTCTCAGGAAGCTCTTCAACCTCTTTAGTCTTTGGCACAGAGCCAGGAACATTCCTGGACCTCCCTGCCCCTCTTTTTATGGCCACTCCAACCTTATTTCCCGCCAAAATCTCACCGATGTCTTATCAAAATCCCATGAGAAGCATGGACCAATTGTTAAGTTGTGGTTAGGTCCTACCCAGCTTTTGGTGTCAGTTAAGGATCCTGTACTGATTCAAGAGATGCTTATAAAAGCTGAGGATAAGTTGCCTTTTACTGGAAAAGCATTTCGTCTGGCCTTTGGGCAATCATGTCTCTTTGCCCCTTCTTATGAACAGGTGCAAAAGAGAAGAGAAACATTGGCAACAGAATTGAATGAAAGATTGCTCAAGACTGCTGATTTGATTCCAATGAACGTTACAGACTTTATTGTGGATAAAATAGAAAGCATCAGTGCTAAAGGAAAAATTGATTGTGGGTTGGTTTCTCAGCATATAGCTTTCACCCTAATGGGAGCCACATTCTTTGGAGATGGCTTTCTGACCAGTCCAAAAGCTGCGATTTATGAGGAACTCCTTATGATGATTGCTAAAGATGCTTGCTTTTGGGCTTCCTATAATGTTACTCCTTTCTGGAAACAAGGATTTTGGAGGTATCAATGCTTATGTACTAAGCTGAAATGCCTAACCAGCGACATTGTTCAACATTGCAGAAAAAGCTGCAAATTATTTGGCCAAATTGATCAAAATTTTCATCATGAAAGTTCTAACAAAGAAATAAAGTCAGCACATGGTTCGCAGTGCTGTTCTGACAATGAGTTTGAAGATTACTATTTCTTTCGTGACCTCAATGATCATCAAAATGCTAAAGAAAAAGAAGAGCCTTCTGGGAACATCATGCGTGTGATGTTTCATGGATGTCATACAACCGCTGCTTTAATATCCAATATATTGACTAGGCTTGCCATGCATCCAGAAATACAAGATAAGGTTTATTCTGAGATTAGCATGGTAGGGAAGAACCCATCAAAATATGAGCAGGAGGATATTTACAGGATGCCTTTGTTACTGGCTGCAATCTATGAATCTGCACGCCTTCTGCCGACTGGTCCCATGCTACAGAGGTGTTCTCTGGAACATGACTTAAGCCTTTCAACTGGTGTAACCATACCTGCTGGAGCAGTGCTGGTTGTGCCCATTCAATTGGTACAAACAGATGACACCAGTTGGGGGAGTGATGCAAGTGACTTTAATCCATACCGATTTCTTTCAAATCATGCAAAGGGATCAGGTTCTGCTGAAGAAATTACAAAGTCTGGTTCCAATTTGCTCGAACTAAATGATCCAAATGAAAACACAGCATTTCTGCCTTTCGGATCTGGTACACGCGCATGTGTTGGGCAGAAATTTGTCATCCAAGTCATTGCAACATTGCTGGCATCATTACTCAAAAAATATGAGATAAAATCTTACCCAGAATTAGGTGATAACTCAGAACCAAGTTTGAAGAATCATTATCCTAACTCGCCTGTATTATTTATTAGAAGGGACCAGTGA 1743 0.4188 MSSIPYPCDDSSSSSSVPTSFLGLLLLHYSRSRCNSDSHGHSSSELLRDFANRELNAFLWLSLFLVTALLLRKLFNLFSLWHRARNIPGPPCPSFYGHSNLISRQNLTDVLSKSHEKHGPIVKLWLGPTQLLVSVKDPVLIQEMLIKAEDKLPFTGKAFRLAFGQSCLFAPSYEQVQKRRETLATELNERLLKTADLIPMNVTDFIVDKIESISAKGKIDCGLVSQHIAFTLMGATFFGDGFLTSPKAAIYEELLMMIAKDACFWASYNVTPFWKQGFWRYQCLCTKLKCLTSDIVQHCRKSCKLFGQIDQNFHHESSNKEIKSAHGSQCCSDNEFEDYYFFRDLNDHQNAKEKEEPSGNIMRVMFHGCHTTAALISNILTRLAMHPEIQDKVYSEISMVGKNPSKYEQEDIYRMPLLLAAIYESARLLPTGPMLQRCSLEHDLSLSTGVTIPAGAVLVVPIQLVQTDDTSWGSDASDFNPYRFLSNHAKGSGSAEEITKSGSNLLELNDPNENTAFLPFGSGTRACVGQKFVIQVIATLLASLLKKYEIKSYPELGDNSEPSLKNHYPNSPVLFIRRDQ 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151100g00027 580 SUPERFAMILY Cytochrome P450 84 578 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151100g00027 580 PANTHER CYTOCHROME P450 FAMILY 4 66 553 - -
Stsc151100g00027 580 CDD cytochrome_P450 119 555 - -
Stsc151100g00027 580 PRINTS E-class P450 group I signature 115 134 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151100g00027 580 PRINTS E-class P450 group I signature 517 527 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151100g00027 580 PRINTS E-class P450 group I signature 527 550 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151100g00027 580 PRINTS E-class P450 group I signature 376 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151100g00027 580 Pfam Cytochrome P450 89 555 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151100g00027 580 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 520 529 IPR017972 GO:0005506|GO:0016705
Stsc151100g00027 580 PRINTS P450 superfamily signature 420 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151100g00027 580 PRINTS P450 superfamily signature 527 538 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151100g00027 580 PRINTS P450 superfamily signature 367 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151100g00027 580 PRINTS P450 superfamily signature 518 527 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc151100g00027 580 Gene3D Cytochrome P450 80 569 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151100g00027 Stsc-Chr151100 137597 143807 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151100g00027 55 549 Cytochrome P450 AT1G13710 23.828 3.64e-23 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151100g00027 - - ahf:112782798 1049.27