Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc151100g00026 ATGTATATGAATAATATTACTAATGGATCTTTAATTTTATTTATTGTGGAGAAAAGGATGGAGAAGATCAACATGAAGAAATTGAGGTGTCAAGCCAAGGTAATAGGCACCATTGTTACAGTAGCTGGGGCCACTGTTATGACCTTGTACAAAGGCCCTGTTGTGGAGATGGTGTGGACCAAACATGCATCTCATCATCATCGTAGTAAAACAAATACCAAAATATCATCCTCTGAAAAAGATTGGTTCATAGGCTCCATATTTGTTATCATTTCTACCCTAGCTTGGGCATCCCTCTTTGTTTTACAGGCCAAAGTGATAGAGACATACAAGAATCATCAACTTAGCCTCACATCACTCATCTGCTTCATAGGAATGATTCAAGCTACTGTTGTTACTTTTTTAATGGAACACAAAACTTCAGTCTGGTCAATTGGCTGGGATATGAACTTGCTAGCTGCTGCCTATTCTGGTGTTTTTGCATCAAGCATGTCATACTACGTGCAAGGATTAGTGATGGAGAAGAAAGGGCCTGTTTTTGCAACTGCATTTAGCCCTCTCATGATGATCATCGTCGCCATAATGGGCTCCTTTATTCTCTCTGAACAAATTTATCTTGGAGGGGTGGTTGGCGCCATTTTAATTATTATAGGCTTATACTCAGTTTTGTGGGGAAAGAATAAAGAACAAAAACAGATAATGGAGAACAAAGTGACAGACGAGAATATATCCTTGCCTATAAAGTGTGCTCAAATTGATGAAAAAAATTCAAATCAAAATGCTGAAGCAGCCAACAAAATATCTTTGGTGGCAATTGATTTGTCTCTCCCTAATTCTCACATGAATGTTATTAACCAAGAAGAAAAGTTTTAA 873 0.3757 MYMNNITNGSLILFIVEKRMEKINMKKLRCQAKVIGTIVTVAGATVMTLYKGPVVEMVWTKHASHHHRSKTNTKISSSEKDWFIGSIFVIISTLAWASLFVLQAKVIETYKNHQLSLTSLICFIGMIQATVVTFLMEHKTSVWSIGWDMNLLAAAYSGVFASSMSYYVQGLVMEKKGPVFATAFSPLMMIIVAIMGSFILSEQIYLGGVVGAILIIIGLYSVLWGKNKEQKQIMENKVTDENISLPIKCAQIDEKNSNQNAEAANKISLVAIDLSLPNSHMNVINQEEKF 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc151100g00026 290 Pfam EamA-like transporter family 84 223 IPR000620 GO:0016020
Stsc151100g00026 290 SUPERFAMILY Multidrug resistance efflux transporter EmrE 131 228 - -
Stsc151100g00026 290 Gene3D ABC transporter type 1, transmembrane domain 61 246 IPR036640 GO:0005524|GO:0016020
Stsc151100g00026 290 PANTHER WAT1-RELATED PROTEIN 12 236 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc151100g00026 Stsc-Chr151100 131101 135537 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc151100g00026 3 288 Nodulin-like Gene Family AT5G07050 55.973 2.45e-104 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc151100g00026 - - gmx:100804359 356.681